RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 A0A1W2PPB8 328 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 A0A1W2PRS3 328 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 KIR3DP1A8MWS1 328 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NPIPA5E9PKD4 350 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 MS4A18H0YCH9 400 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NME2P1O60361 137 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 SERPINI2O75830 405 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 GABARAPO95166 117 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 SP1P08047 785 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 ADRA2AP08913 450 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 CD36P16671 472 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NME2P22392 152 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 GDF1P27539 372 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 SFTPDP35247 375 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 ETV1P50549 477 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 BLVRAP53004 296 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 GPR85P60893 370 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 FOXO1Q12778 655 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 MLLT11Q13015 90 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 MS4A18Q3C1V0 323 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 TIMM50Q3ZCQ8 353 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 PAQR6Q6TCH4 344 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 TMPRSS11AQ6ZMR5 421 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 TMEM178AQ8NBL3 297 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 C12orf43Q96C57 262 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NMD3Q96D46 503 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 ZHX1-C8orf76Q96EF9 292 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 DNAJA3Q96EY1 480 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 KLHL15Q96M94 604 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 SFXN2Q96NB2 322 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 OR5M11Q96RB7 305 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 CNN2Q99439 309 aaKnown RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NAA11Q9BSU3 229 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 ERVK13-1Q9NX77 482 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 QPCTLQ9NXS2 382 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 SEC14L4Q9UDX3 406 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 CLEC2DQ9UHP7 191 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NPIPA1Q9UND3 350 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 CAB39Q9Y376 341 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NOX1Q9Y5S8 564 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 FKBP7Q9Y680 259 aa13.53□□□□□ -0.24
TRAPPC9-205ENST00000518839 NCKAP5O14513 1909 aa13.52□□□□□ -0.24
TRAPPC9-205ENST00000518839 FREM3P0C091 2139 aa13.52□□□□□ -0.24
TRAPPC9-205ENST00000518839 CUL9Q8IWT3 2517 aa13.52□□□□□ -0.24
TRAPPC9-205ENST00000518839 LOC102725191A0A1B0GVB3 256 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 A0A1W2PNR3 127 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 DAPL1A0PJW8 107 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 DCDC2BA2VCK2 349 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 A6NL46 340 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 C12orf71A8MTZ7 269 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 H3BMQ9 156 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 CCRL2O00421 344 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ARHGEF9O43307 516 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 AKR7A3O95154 331 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 VAMP5O95183 116 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 APOL3O95236 402 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 BCL10O95999 233 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 SCG5P05408 212 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 OR2T7P0C7T2 308 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 LIMS3P0CW19 117 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 LIMS4P0CW20 117 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 HSMCR30P0CW71 290 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 CLUP10909 449 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 B3GALT5-AS1P59052 145 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ARG2P78540 354 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 HSF1Q00613 529 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 FOXC1Q12948 553 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 DNM1P34Q6PK57 102 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 SHFQ7M4L6 423 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 SULF2Q8IWU5 870 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 UEVLDQ8IX04 471 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 EXD3Q8N9H8 876 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 FAM83FQ8NEG4 500 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 OR2T27Q8NH04 317 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ASB10Q8WXI3 467 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 SMPDL3BQ92485 455 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 OXGR1Q96P68 337 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 UBL7Q96S82 380 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ALG12Q9BV10 488 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ZNF552Q9H707 407 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 TMEM185BQ9H7F4 350 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ADGRL4Q9HBW9 690 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 RPRD1BQ9NQG5 326 aaKnown RBP13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 ASB6Q9NWX5 421 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 PLA2G3Q9NZ20 509 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 RASD1Q9Y272 281 aa13.52□□□□□ -0.25
TRAPPC9-205ENST00000518839 PRSS37A4D1T9 235 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 PINLYPA6NC86 204 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 AQP7P3A6NL99 342 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 SLC22A1O15245 554 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 TRAPPC6AO75865 159 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 F10P00742 488 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 PLGP00747 810 aaPredicted RBP13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 HPNP05981 417 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 GYPBP06028 91 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 SHC1P29353 583 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 CRABP1P29762 137 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 TGFBR2P37173 567 aa13.51□□□□□ -0.25
TRAPPC9-205ENST00000518839 LIPAP38571 399 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms