RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 DOK5Q9P104 306 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ABRACLQ9P1F3 81 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SIX4Q9UIU6 781 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 VAX2Q9UIW0 290 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 NAGKQ9UJ70 344 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ADAM29Q9UKF5 820 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 A4GNTQ9UNA3 340 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 RNF24Q9Y225 148 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 FAM96BQ9Y3D0 163 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CHST2Q9Y4C5 530 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 CLDN16Q9Y5I7 305 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SPIN1Q9Y657 262 aaPredicted RBP4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 ATP23Q9Y6H3 246 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 SLIT2O94813 1529 aa4.41□□□□□ -1.7
HMGB1P19-201ENST00000517578 NHSL1Q5SYE7 1610 aa4.4□□□□□ -1.7
HMGB1P19-201ENST00000517578 A0A087WWC5 75 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TGIF2-C20orf24A0A0A6YYL0 155 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TCRBV5S1A1TA0A578 114 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM129A0AVI4 362 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLEC18AA5D8T8 446 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RNF222A6NCQ9 220 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF726A6NNF4 738 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM90A27PA6NNH2 459 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 F6UZH7 168 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 G3V3Q6 166 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACOT7O00154 380 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 GTPBP1O00178 669 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF593O00488 134 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACKR2O00590 384 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CXCL11O14625 94 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIP5K1BO14986 540 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CYB5BO43169 146 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 EEF1E1O43324 174 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF749O43361 778 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 NARSO43776 548 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 C1RP00736 705 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FSHBP01225 129 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PMP2P02689 132 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SEMG1P04279 462 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RLN1P04808 185 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 APODP05090 189 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SERPIND1P05546 499 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ERCC1P07992 297 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHRM4P08173 479 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL3P08700 152 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 C1SP09871 688 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5H8P0DN80 308 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 UROSP10746 265 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 POU3F2P20265 443 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTNP21246 168 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF10P21506 573 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 BMP5P22003 454 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPIBP23284 216 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 DGKAP23743 735 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MGAT1P26572 445 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 HOXC9P31274 260 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL2RGP31785 369 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MC5RP33032 325 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 RPS10P46783 165 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 IDH2P48735 452 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SELENOPP49908 381 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMSP52788 366 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAS2R38P59533 333 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAS2R19P59542 299 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZP1P60852 638 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 STXBP1P61764 594 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDK5Q00535 292 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 BDH1Q02338 343 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 MXD1Q05195 221 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL10RBQ08334 325 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SPOCK1Q08629 439 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF543Q08ER8 600 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 AIMP2Q13155 320 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 PPIGQ13427 754 aaKnown RBP eCLIP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SQSTM1Q13501 440 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSHL1Q14406 222 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF234Q14588 700 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 HERPUD1Q15011 391 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC9A3R2Q15599 337 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 HNRNPA1L2Q32P51 320 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 CRY2Q49AN0 593 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 VWA2Q5GFL6 755 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC25A30Q5SVS4 291 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM182AQ5T1J6 154 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 GLT8D1Q68CQ7 371 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 HBMQ6B0K9 141 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 C22orf42Q6IC83 251 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF790Q6PG37 636 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM270Q6UE05 265 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ENPP6Q6UWR7 440 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 DPY19L2P2Q6ZN68 376 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAM83HQ6ZRV2 1179 aaPredicted RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF534Q76KX8 674 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 NUFIP2Q7Z417 695 aaKnown RBP4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 LHFPL4Q7Z7J7 247 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDFY1Q8IWB7 410 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCN4BQ8IWT1 228 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 C9orf40Q8IXQ3 194 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 GABRG1Q8N1C3 465 aa4.4□□□□□ -1.71
HMGB1P19-201ENST00000517578 Q8N1X5 172 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms