RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 RAC3P60763 192 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SLC35A1P78382 337 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CHRNB3Q05901 458 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SRSF1Q07955 248 aaKnown RBP eCLIP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RASGEF1BQ0VAM2 473 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ST3GAL3Q11203 375 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TRAP1Q12931 704 aaKnown RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TOP3AQ13472 1001 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PMS2P11Q13670 270 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 MTX3Q5HYI7 312 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RIPPLY2Q5TAB7 128 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 C1orf140Q5VVS0 124 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 OR2A2Q6IF42 318 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PGBD2Q6P3X8 592 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 XKRXQ6PP77 449 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FCRLAQ7L513 359 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RRM2BQ7LG56 351 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CYP4Z1Q86W10 505 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SPATA24Q86W54 205 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FAM86B1Q8N7N1 296 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TMEM99Q8N816 258 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LINC00482Q8N8I6 264 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CNEP1R1Q8N9A8 125 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 OR52J3Q8NH60 311 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 MBD3L2Q8NHZ7 208 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SSC4DQ8WTU2 575 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CA5BP1Q8WTZ4 195 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ASB5Q8WWX0 329 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CPNE4Q96A23 557 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ASB9Q96DX5 294 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 KTI12Q96EK9 354 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SLC41A3Q96GZ6 507 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ZNF300Q96RE9 604 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 EPYCQ99645 322 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SRXN1Q9BYN0 137 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 UCK2Q9BZX2 261 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TRIM15Q9C019 465 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 COQ10BQ9H8M1 238 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TMEM140Q9NV12 185 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 C6orf203Q9P0P8 240 aaPredicted RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CLCF1Q9UBD9 225 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SLC7A7Q9UM01 511 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CLEC4AQ9UMR7 237 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 A4GNTQ9UNA3 340 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 GTF2A1LQ9UNN4 478 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 RNF6Q9Y252 685 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TRAPPC4Q9Y296 219 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ZNF175Q9Y473 711 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ENPP4Q9Y6X5 453 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 DIDO1Q9BTC0 2240 aaKnown RBP5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 BOD1L1Q8NFC6 3051 aa5.17□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ABCA12Q86UK0 2595 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PCNX1Q96RV3 2341 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 IGKV1D-42A0A075B6H8 117 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LIPT2A6NK58 231 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 AQP12BA6NM10 295 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ACOT8O14734 319 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FFAR1O14842 300 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 NPIPB7O75200 414 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CIB2O75838 187 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 AKR7A3O95154 331 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 OR6A2O95222 327 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CLDN14O95500 239 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 PMS2P2O95744 297 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CH25HO95992 272 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LDLRP01130 860 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 THY1P04216 161 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 HIST1H2ABP04908 130 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FABP3P05413 133 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 GPIP06744 558 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 YES1P07947 543 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 THRBP10828 461 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 UMPSP11172 480 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FCGR2AP12318 317 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ITGA2P17301 1181 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 KLK2P20151 261 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ATP6V1B2P21281 511 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 BMP5P22003 454 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CEACAM8P31997 349 aaPredicted RBP5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 OPRM1P35372 400 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 KIR2DL3P43628 341 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 CTXN1P60606 82 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 SIRPAP78324 504 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 IL1RL1Q01638 556 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 EGR4Q05215 589 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LTBQ06643 244 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FOXF2Q12947 444 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FLOT2Q14254 428 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TRAM2Q15035 370 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ZNF239Q16600 458 aaKnown RBP5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 FAM98BQ52LJ0 330 aaKnown RBP5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 OTUD3Q5T2D3 398 aaPredicted RBP5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 EEF1A1P5Q5VTE0 462 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 TMEM225Q6GV28 225 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 LCN8Q6JVE9 175 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 C5orf46Q6UWT4 87 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 WDR88Q6ZMY6 472 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 HIST3H2AQ7L7L0 130 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 ADGRE4PQ86SQ3 457 aa5.16□□□□□ -1.58
SCARNA6.1-201ENST00000516989 GPAT4Q86UL3 456 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms