RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 SSU72Q9NP77 194 aaKnown RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 OBP2BQ9NPH6 170 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 SDR39U1Q9NRG7 319 aaPredicted RBP7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RAB21Q9UL25 225 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 RASD1Q9Y272 281 aa7.09□□□□□ -1.27
SCARNA20.3-201ENST00000516913 A0A087WUJ7 227 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HDAC3O15379 428 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SLC43A1O75387 559 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DEAF1O75398 565 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SLC22A3O75751 556 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 VAMP5O95183 116 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 NAT2P11245 290 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 B4GALT1P15291 398 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 MAGEB1P43366 347 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 GIPRP48546 466 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 IFFO1Q0D2I5 559 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 CAMK2DQ13557 499 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DAG1Q14118 895 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 MFSD13AQ14CX5 517 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DPY19L1Q2PZI1 675 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TUSC1Q2TAM9 212 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ALKBH6Q3KRA9 238 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 LIN52Q52LA3 116 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ZNF311Q5JNZ3 666 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 WDR93Q6P2C0 686 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 LINC00114Q6XXX2 140 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 THSD4Q6ZMP0 1018 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 H1FNTQ75WM6 255 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 PEX5LQ8IYB4 626 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 LRRC17Q8N6Y2 441 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ANKRD42Q8N9B4 389 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 VPS37AQ8NEZ2 397 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 GPR32P1Q8NGA4 272 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 OR4F15Q8NGB8 312 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 MRPL24Q96A35 216 aaKnown RBP7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 A4GALTQ9NPC4 353 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 G6PC2Q9NQR9 355 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DCAF16Q9NXF7 216 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 VAPAQ9P0L0 249 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 OPN4Q9UHM6 478 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 RCE1Q9Y256 329 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SPEF1Q9Y4P9 236 aa7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SOX21Q9Y651 276 aaPredicted RBP7.08□□□□□ -1.28
SCARNA20.3-201ENST00000516913 NBEAL2Q6ZNJ1 2754 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 LOC105371242A0A075B767 164 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 IGKV1D-43A0A0B4J1Z2 117 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 A0A0B4J2E0 115 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 A0A0G2JPF8 293 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 A0A1B0GX12 115 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ZNF99A8MXY4 864 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HNRNPCL2B2RXH8 293 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HNRNPCL3B7ZW38 293 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 PLPP3O14495 311 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HNRNPCL1O60812 293 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SASH3O75995 380 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HNRNPCL4P0DMR1 293 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ARAFP10398 606 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HOXB1P14653 301 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 IFNGR1P15260 489 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ZNF43P17038 809 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ADRA2CP18825 462 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DVL1P1P54792 670 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 CDH12P55289 794 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 UBE2NP61088 152 aaKnown RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HPCAP84074 193 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 IL1RL1Q01638 556 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 RAB39AQ14964 217 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 DLEU7Q6UYE1 221 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 PTOV1Q86YD1 416 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ZNF440Q8IYI8 595 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 RFLNBQ8N5W9 214 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 LSMEM1Q8N8F7 131 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ANKK1Q8NFD2 765 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 NFKBIDQ8NI38 313 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 MGARPQ8TDB4 240 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HPS1Q92902 700 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 SLC38A4Q969I6 547 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 EBF4Q9BQW3 602 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TAPBPLQ9BX59 468 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 RAB1BQ9H0U4 201 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 METTL17Q9H7H0 456 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 KCNK9Q9NPC2 374 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 ZNF275Q9NSD4 429 aaPredicted RBP7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HIF1ANQ9NWT6 349 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TAS2R5Q9NYW4 299 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 P2RX2Q9UBL9 471 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 REV1Q9UBZ9 1251 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 FKBP7Q9Y680 259 aa7.07□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TRAV36DV7A0A075B6V5 113 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TMEM120BA0PK00 339 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 HAX1O00165 279 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 CLIC1O00299 241 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TM9SF1O15321 606 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 RGS16O15492 202 aaPredicted RBP7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 TCF21O43680 179 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 KRT33AO76009 404 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 AHSA1O95433 338 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 KRT75O95678 551 aa7.06□□□□□ -1.28
SCARNA20.3-201ENST00000516913 FSHBP01225 129 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms