RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HLA-DOBP13765 273 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 CHD4Q14839 1912 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 MARCH8Q5T0T0 291 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 BPHLQ86WA6 291 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM217Q8N7C4 229 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 PHYHIPQ92561 330 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 TUBB1Q9H4B7 451 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 FBXL4Q9UKA2 621 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 MOKQ9UQ07 419 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 CD79AP11912 226 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 SNTB1Q13884 538 aaKnown RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 AADACL3Q5VUY0 350 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF680Q8NEM1 530 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 OR51S1Q8NGJ8 323 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ELF4Q99607 663 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 AMBRA1Q9C0C7 1298 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 ENTPD2Q9Y5L3 495 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 NUP98P52948 1817 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 TIAM2Q8IVF5 1701 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 A0A1B0GTW7 788 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 LRIT2A6NDA9 550 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 C17orf112F2Z3M2 114 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 BLVRBP30043 206 aaPredicted RBP12.32□□□□□ -0.44
TCOF1-214ENST00000515035 IL2RGP31785 369 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 SRPXP78539 464 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 KIAA0895LQ68EN5 471 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 FAM57BQ71RH2 274 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 LFNGQ8NES3 379 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 TAF9BQ9HBM6 251 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 RARRES3Q9UL19 164 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 CBY1Q9Y3M2 126 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 CORINQ9Y5Q5 1042 aa12.32□□□□□ -0.44
TCOF1-214ENST00000515035 COL16A1Q07092 1604 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 OR6C76A6NM76 312 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 H7C1C5 153 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CCSO14618 274 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ATXN1LP0C7T5 689 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CPMP14384 443 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ADRA1AP35348 466 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 HTR3AP46098 478 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 THBS3P49746 956 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 GZMKP49863 264 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 LCN6P62502 163 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CDC20Q12834 499 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 SECTM1Q8WVN6 248 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 FAM3DQ96BQ1 224 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 MRPL38Q96DV4 380 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 STEAP1Q9UHE8 339 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CBLCQ9ULV8 474 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 NAV1Q8NEY1 1877 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM200CA6NKL6 621 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 DRGXA6NNA5 263 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 OR2C1O95371 312 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 SEMA4FO95754 770 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CPN1P15169 458 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 FOXK2Q01167 660 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF239Q16600 458 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 TAZQ16635 292 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM31Q5JXX7 168 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ESPNLQ6ZVH7 1005 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 PLXDC1Q8IUK5 500 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 NANOGP1Q8N7R0 232 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 MRPS28Q9Y2Q9 187 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 PPP5D1E7EU14 171 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 TRAPPC2LH3BP13 241 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 DFFBO76075 338 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 C1orf105O95561 183 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ZNF728P0DKX0 622 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CD80P33681 288 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 SNRPGP62308 76 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 KIAA0907Q7Z7F0 614 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 OR5M8Q8NGP6 311 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 DYNC2LI1Q8TCX1 351 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 PSMF1Q92530 271 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 PIGCQ92535 297 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 DCLRE1CQ96SD1 692 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 NMNAT3Q96T66 252 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 PARP12Q9H0J9 701 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ARV1Q9H2C2 271 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 FKRPQ9H9S5 495 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 C5P01031 1676 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 LOC102725191A0A1B0GVB3 256 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ZFP92A6NM28 416 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 H0YIV9 168 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 SOCS7O14512 581 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ADAMTS4O75173 837 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 IGHG1P01857 330 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 APLNRP35414 380 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 RGRP47804 291 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 OR2B8PP59922 312 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 EXOSC2Q13868 293 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 CTU2Q2VPK5 515 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 RABEPKQ7Z6M1 372 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 MRPL43Q8N983 215 aaKnown RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 NANPQ8TBE9 248 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 SFT2D1Q8WV19 159 aa12.31□□□□□ -0.44
TCOF1-214ENST00000515035 ANKRD9Q96BM1 317 aaPredicted RBP12.31□□□□□ -0.44
TCOF1-214ENST00000515035 TMEM43Q9BTV4 400 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms