RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 ZCCHC12Q6PEW1 402 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RRM2BQ7LG56 351 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LRRTM1Q86UE6 522 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 RSC1A1Q92681 617 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TCTN2Q96GX1 697 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 C10orf90Q96M02 699 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 LRFN5Q96NI6 719 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 MNTQ99583 582 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ELOVL6Q9H5J4 265 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 ABRACLQ9P1F3 81 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 PCYT1BQ9Y5K3 369 aaPredicted RBP6.75□□□□□ -1.33
CLIP1-205ENST00000514271 HRH3Q9Y5N1 445 aa6.75□□□□□ -1.33
CLIP1-205ENST00000514271 TEX13CA0A0J9YWL9 993 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TRBV5-5A0A0J9YX44 114 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 H3BUI4 141 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 GDF9O60383 454 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CTNSO60931 367 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 MTX2O75431 263 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 RDH16O75452 317 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ABHD16AO95870 558 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ITGB2P05107 769 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF735P0CB33 412 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SLC25A4P12235 298 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CD1CP29017 333 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TLX1P31314 330 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SMSP52788 366 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 RPS13P62277 151 aaKnown RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 GINS1Q14691 196 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ISXQ2M1V0 245 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ZNF542PQ5EBM4 170 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 RHOUQ7L0Q8 258 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SSX6Q7RTT6 188 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PRR18Q8N4B5 295 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 LMNTD1Q8N9Z9 388 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 OR52E1Q8NGJ3 308 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 OR9Q1Q8NGQ5 310 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 NEIL3Q8TAT5 605 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 STOML3Q8TAV4 291 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SLC41A2Q96JW4 573 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ART5Q96L15 291 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 NLNQ9BYT8 704 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 HINT3Q9NQE9 182 aaKnown RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SRPK3Q9UPE1 567 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ANGPT4Q9Y264 503 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 MEX3AA1L020 520 aaKnown RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CPED1A4D0V7 1026 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TRABD2BA6NFA1 517 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 FAM74A7A6NL05 159 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 NUDT19A8MXV4 375 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PRR32B1ATL7 298 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 IGF2P01344 180 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 HSMCR30P0CW71 290 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 STAT5AP42229 794 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 MAZP56270 477 aaKnown RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CCL7P80098 99 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 REEP5Q00765 189 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 MC2RQ01718 297 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 GPR18Q14330 331 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 NTRK2Q16620 822 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 FAM74A3Q4VXF1 159 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TRIM40Q6P9F5 258 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 AGTRAPQ6RW13 159 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 OR4K5Q8NGD3 323 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 FAM216AQ8WUB2 273 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 EDARADDQ8WWZ3 215 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SFXN2Q96NB2 322 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TAAR9Q96RI9 348 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SLC19A3Q9BZV2 496 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SLC25A32Q9H2D1 315 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 EVA1AQ9H8M9 152 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 NUDT15Q9NV35 164 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 KLHL9Q9P2J3 617 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 COPS3Q9UNS2 423 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 FOXJ3Q9UPW0 622 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PTPRBP23467 1997 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TRBV5-7A0A0A0MS05 114 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 LDLRAD4O15165 306 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PPM1DO15297 605 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PPIHO43447 177 aaKnown RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SRPX2O60687 465 aaPredicted RBP6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PEPDP12955 493 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CCR8P51685 355 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 PGGHGQ32M88 737 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SFRP5Q5T4F7 317 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 HES3Q5TGS1 186 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 GARNL3Q5VVW2 1013 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 SLC22A10Q63ZE4 541 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 MBOAT2Q6ZWT7 520 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 D2HGDHQ8N465 521 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 RFLNBQ8N5W9 214 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 CCL4L1Q8NHW4 92 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 STK35Q8TDR2 534 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 BABAM2Q9NXR7 383 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ARL15Q9NXU5 204 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 ACTR10Q9NZ32 417 aa6.74□□□□□ -1.33
CLIP1-205ENST00000514271 TLX2O43763 284 aaPredicted RBP6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SLC25A17O43808 307 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SOX14O95416 240 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 SLC16A8O95907 504 aa6.73□□□□□ -1.33
CLIP1-205ENST00000514271 IFNA14P01570 189 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms