RNA–Protein interactions for RNA: ENST00000512274.1

PDLIM5-217, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 372 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-217ENST00000512274 MAKP20794 623 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 BMP5P22003 454 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PCMT1P22061 227 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 APOBEC1P41238 236 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 CASP3P42574 277 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 IDH2P48735 452 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 CLK1P49759 484 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 SSR4P51571 173 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 POLR2HP52434 150 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 FBXW4P57775 412 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 FXYD6P3P58550 94 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PPIAP62937 165 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PLGLB1Q02325 96 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 MFSD13AQ14CX5 517 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 TBCEQ15813 527 aaPredicted RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PGGHGQ32M88 737 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ZBED5Q49AG3 693 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ARMC4Q5T2S8 1044 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 GTF2IRD2BQ6EKJ0 949 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 SMARCD3Q6STE5 483 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PTCHD4Q6ZW05 846 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC46A3Q7Z3Q1 461 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 MARCH3Q86UD3 253 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 GTF2IRD2Q86UP8 949 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 SPARTQ8N0X7 666 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 LRRC75A-AS1Q8N1F1 130 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 CADM2Q8N3J6 435 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 SVOPQ8N4V2 548 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 OR52L1Q8NGH7 329 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 OR8D4Q8NGM9 314 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 FCGR1BQ92637 280 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 MYDGFQ969H8 173 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 DTNBP1Q96EV8 351 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 MRGPRX4Q96LA9 322 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 BCL7BQ9BQE9 202 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 JAM3Q9BX67 310 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 CDCA4Q9BXL8 241 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ANGPTL4Q9BY76 406 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 PLA2G12AQ9BZM1 189 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 OR52D1Q9H346 318 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 UBQLN3Q9H347 655 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 FKRPQ9H9S5 495 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 FANCFQ9NPI8 374 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 TAS2R10Q9NYW0 307 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF229Q9UJW7 825 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 OSGIN1Q9UJX0 560 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 HIF3AQ9Y2N7 669 aa9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 RPL36Q9Y3U8 105 aaKnown RBP9.38□□□□□ -0.91
PDLIM5-217ENST00000512274 NPIPB13A6NJU9 1138 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ELOA3DA6NLF2 546 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 NPIPB4C9JG80 1138 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SURF4O15260 269 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 RGS10O43665 173 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 OR2T1O43869 369 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 PIP5K1CO60331 668 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 OR7A10O76100 309 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 NDUFB2O95178 105 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SNX4O95219 450 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SOX14O95416 240 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 CNOT4O95628 575 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 TXNDC12O95881 172 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 PEPDP12955 493 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC6A6P31641 620 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 EIF1P41567 113 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 GPR4P46093 362 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 EGR4Q05215 589 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 RUNX1T1Q06455 604 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 CRYZQ08257 329 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 IRF3Q14653 427 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 QPRTQ15274 297 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF74Q16587 644 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 NDUFAF6Q330K2 333 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ELOA3BQ3SY89 546 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 GLYR1Q49A26 553 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SYT14P1Q58G82 188 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 C1orf185Q5T7R7 199 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 NXNL2Q5VZ03 156 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 XAF1Q6GPH4 301 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ACSM5Q6NUN0 579 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 CYP4Z2PQ8N1L4 340 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ZFP62Q8NB50 900 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 MAPK1IP1LQ8NDC0 245 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ELOA3Q8NG57 546 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 PFN4Q8NHR9 129 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 ZNF420Q8TAQ5 688 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 FANK1Q8TC84 345 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 DUSP19Q8WTR2 217 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 RNASE6Q93091 150 aaKnown RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 RFKQ969G6 155 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 LRRC46Q96FV0 321 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 TMEM41AQ96HV5 264 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SNX18Q96RF0 628 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 TSSK6Q9BXA6 273 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 POTEKPQ9BYX7 375 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 NDEL1Q9GZM8 345 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 RACGAP1Q9H0H5 632 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 CMC2Q9NRP2 79 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 PAK1IP1Q9NWT1 392 aaPredicted RBP9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 SLC6A5Q9Y345 797 aa9.37□□□□□ -0.91
PDLIM5-217ENST00000512274 MRPS18CQ9Y3D5 142 aaKnown RBP9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms