RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 NHLRC1Q6VVB1 395 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 SLC46A3Q7Z3Q1 461 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 VTCN1Q7Z7D3 282 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 CIARTQ8N365 385 aaPredicted RBP14.41□□□□□ -0.1
DDX41-213ENST00000512027 GPR137CQ8N3F9 429 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 ZNF426Q9BUY5 554 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 GSX2Q9BZM3 304 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 CXorf56Q9H5V9 222 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 SEC61A2Q9H9S3 476 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 CRLF2Q9HC73 371 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 POU2F3Q9UKI9 436 aa14.41□□□□□ -0.1
DDX41-213ENST00000512027 C2CD3Q4AC94 2353 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 LOC102725191A0A1B0GVB3 256 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 ZNF503-AS2A6NEH8 195 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 ATP6V1G2-DDX39BF2Z307 99 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 PIP5K1CO60331 668 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 NDUFS7O75251 213 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 MT-ATP6P00846 226 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 CD8AP01732 235 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 UMPSP11172 480 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 YAP1P46937 504 aaKnown RBP14.4□□□□□ -0.1
DDX41-213ENST00000512027 GSK3BP49841 420 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 ATP5J2P56134 94 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 GNGT1P63211 74 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 MELKQ14680 651 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 SSX8Q7RTT4 187 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 ARPINQ7Z6K5 226 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 CPLX4Q7Z7G2 160 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 PIK3C3Q8NEB9 887 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 MPP4Q96JB8 637 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 RADILQ96JH8 1075 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 EFCAB1Q9HAE3 211 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 C20orf141Q9NUB4 165 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 ZNF701Q9NV72 531 aaPredicted RBP14.4□□□□□ -0.1
DDX41-213ENST00000512027 TAS2R5Q9NYW4 299 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 RIMS3Q9UJD0 308 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 NOX1Q9Y5S8 564 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 SNX13Q9Y5W8 968 aa14.4□□□□□ -0.1
DDX41-213ENST00000512027 NIPBLQ6KC79 2804 aaeCLIP14.4□□□□□ -0.1
DDX41-213ENST00000512027 IGHV1-18A0A0C4DH31 117 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 OR6C65A6NJZ3 312 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 RPL36A-HNRNPH2H7BZ11 118 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 OVOL3O00110 214 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 CXCR6O00574 342 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 AKAP8O43823 692 aaKnown RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 WNT11O96014 354 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 IFNA14P01570 189 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 IFNGR1P15260 489 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 NCK1P16333 377 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 BIDP55957 195 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 LSM11P83369 360 aaKnown RBP eCLIP14.39□□□□□ -0.11
DDX41-213ENST00000512027 MYPOPQ86VE0 399 aaPredicted RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 C20orf196Q8IYI0 205 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 RBM15BQ8NDT2 890 aaKnown RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 GTPBP3Q969Y2 492 aaKnown RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 TRAF4Q9BUZ4 470 aaPredicted RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 NSRP1Q9H0G5 558 aaKnown RBP14.39□□□□□ -0.11
DDX41-213ENST00000512027 ALG2Q9H553 416 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 FKRPQ9H9S5 495 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 NANSQ9NR45 359 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 RHCGQ9UBD6 479 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 MOKQ9UQ07 419 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 MGAT4BQ9UQ53 548 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 ATP23Q9Y6H3 246 aa14.39□□□□□ -0.11
DDX41-213ENST00000512027 GMNCA6NCL1 334 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 H7C1Q1 480 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 J3KTA2 159 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 SMAD7O15105 426 aaKnown RBP14.38□□□□□ -0.11
DDX41-213ENST00000512027 GSTA4O15217 222 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 OR5F1O95221 314 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 OR6A2O95222 327 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 ZNF682O95780 498 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 CELA3BP08861 270 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 ASAH2BP0C7U1 165 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 FUT1P19526 365 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 UBE2NP61088 152 aaKnown RBP14.38□□□□□ -0.11
DDX41-213ENST00000512027 PSME3P61289 254 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 SELENOWP63302 87 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 ANKRD16Q6P6B7 361 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 Q71RC1 249 aaPredicted RBP14.38□□□□□ -0.11
DDX41-213ENST00000512027 NANOGNBQ7Z5D8 188 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 PXKQ7Z7A4 578 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 RNF148Q8N7C7 305 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 BOD1Q96IK1 185 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 C18orf12Q96KH6 178 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 HOPXQ9BPY8 73 aaPredicted RBP14.38□□□□□ -0.11
DDX41-213ENST00000512027 ZNF229Q9UJW7 825 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 GDF2Q9UK05 429 aaPredicted RBP14.38□□□□□ -0.11
DDX41-213ENST00000512027 A4GNTQ9UNA3 340 aa14.38□□□□□ -0.11
DDX41-213ENST00000512027 ARPC4-TTLL3A0A0A6YYG9 625 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 BLOC1S5-TXNDC5H3BN57 136 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 RNF13O43567 381 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 SERPINA1P01009 418 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 MT-ND1P03886 318 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 PAX1P15863 534 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 HACD2Q6Y1H2 254 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 SLC35D2Q76EJ3 337 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 DTX2Q86UW9 622 aa14.37□□□□□ -0.11
DDX41-213ENST00000512027 MEX3DQ86XN8 651 aaKnown RBP14.37□□□□□ -0.11
DDX41-213ENST00000512027 OR6N1Q8NGY5 312 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms