RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 SGCEO43556 437 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CHP2O43745 196 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 TPST2O60704 377 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 SLC19A2O60779 497 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 TBL1XO60907 577 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 AQP8O94778 261 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 NFATC1O95644 943 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 EGFP01133 1207 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 IFNA2P01563 188 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PPBPP02775 128 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRNPP04156 253 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CD48P09326 243 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 FBP1P09467 338 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 H2AFZP0C0S5 128 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 RAP2AP10114 183 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 IFI30P13284 250 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRPH2P23942 346 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 NR4A2P43354 598 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR3A1P47881 315 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CSNK1A1P48729 337 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CCR6P51684 374 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 GPR143P51810 404 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 XKP51811 444 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PRKXP51817 358 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 AKR1D1P51857 326 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 MAPK12P53778 367 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 SIRPAP78324 504 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 TLE4Q04727 773 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PTGR1Q14914 329 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 RTP5Q14D33 572 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 PDGFRLQ15198 375 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 SPA17Q15506 151 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 RPE65Q16518 533 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CTU2Q2VPK5 515 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 AKIRIN2Q53H80 203 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 NKAPLQ5M9Q1 402 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR4F3Q6IEY1 312 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF770Q6IQ21 691 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 BTNL3Q6UXE8 466 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 RBMS3Q6XE24 437 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 MBOAT1Q6ZNC8 495 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF621Q6ZSS3 439 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 H2AFVQ71UI9 128 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 DOK3Q7L591 496 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 UBALD2Q8IYN6 164 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 LGI2Q8N0V4 545 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 MUC20Q8N307 709 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CLIP4Q8N3C7 705 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 BOLLQ8N9W6 283 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 OR5H6Q8NGV6 325 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM3CQ92520 227 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 GGHQ92820 318 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 NAT6Q93015 286 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 KLHDC7BQ96G42 594 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 RPL10LQ96L21 214 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF75AQ96N20 296 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZFP3Q96NJ6 502 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 MCCC1Q96RQ3 725 aaPredicted RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 COPS8Q99627 209 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 C2orf88Q9BSF0 95 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 YTHDF1Q9BYJ9 559 aaKnown RBP4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 CIPCQ9C0C6 399 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 TRIM36Q9NQ86 728 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 ATG2BQ96BY7 2078 aa4.56□□□□□ -1.68
TRAPPC11-208ENST00000511955 MYOFQ9NZM1 2061 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 CFAP54Q96N23 3096 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 PQLC2LA1A4F0 135 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 TTC24A2A3L6 582 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 GRID2IPA4D2P6 1211 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 DISC1C4P0D8 188 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM72CH0Y354 149 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 CXCR6O00574 342 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 YY2O15391 372 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 MAGEB4O15481 346 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 NKX2-8O15522 239 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 KIAA0513O60268 411 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 FKBP6O75344 327 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 AP2A2O94973 939 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 C8BP07358 591 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 ZNF23P17027 643 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 RAB3AP20336 220 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 OGNP20774 298 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 COMTP21964 271 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 HTR2CP28335 458 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 NMBRP28336 390 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 S100A7P31151 101 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 CYLC1P35663 651 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 MAGEA12P43365 314 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 PLP1P60201 277 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 GAGE1Q13065 139 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 CDH18Q13634 790 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 RNF151Q2KHN1 245 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 MS4A13Q5J8X5 152 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 SPIN3Q5JUX0 258 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 SAMD4BQ5PRF9 694 aaKnown RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM72AQ5TYM5 149 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM72DQ6L9T8 149 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 CAPN13Q6MZZ7 669 aaPredicted RBP4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 QSOX2Q6ZRP7 698 aa4.55□□□□□ -1.68
TRAPPC11-208ENST00000511955 FAM72BQ86X60 149 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 139.9 ms