RNA–Protein interactions for RNA: ENST00000511774.1

HMGCS1-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 4

Gene HMGCS1, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-206ENST00000511774 CCDC36Q8IYA8 594 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 GSPT2Q8IYD1 628 aaKnown RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 CLIP4Q8N3C7 705 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 MFSD8Q8NHS3 518 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 OXGR1Q96P68 337 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 MTHFD2LQ9H903 347 aaPredicted RBP16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 ASIC5Q9NY37 505 aa16.18■□□□□ 0.18
HMGCS1-206ENST00000511774 A0A1W2PPW3 197 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 C17orf100A8MU93 164 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 PATE4P0C8F1 98 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 MDKP21741 143 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 CHI3L1P36222 383 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 GIPRP48546 466 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 PTDSS1P48651 473 aaKnown RBP16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 LCN2P80188 198 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 RAB39AQ14964 217 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 GLIPR1L2Q4G1C9 344 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 GKAP1Q5VSY0 366 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 CARD17Q5XLA6 110 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 PAQR4Q8N4S7 273 aaPredicted RBP16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 RAB39BQ96DA2 213 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 TAAR3PQ9P1P4 343 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 NOX1Q9Y5S8 564 aa16.17■□□□□ 0.18
HMGCS1-206ENST00000511774 SMIM23A6NLE4 172 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 M0R082 166 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 HPRP00739 348 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 DBIP07108 87 aaKnown RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 HLA-DOBP13765 273 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 UQCRBP14927 111 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 B4GALT1P15291 398 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 RBMXP38159 391 aaKnown RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 CRYBB2P43320 205 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ERVS71-1P61550 626 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 OCLNQ16625 522 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 SPANXN4Q5MJ08 99 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF813Q6ZN06 617 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF627Q7L945 461 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 C20orf196Q8IYI0 205 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF440Q8IYI8 595 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 DEFB108BQ8NET1 73 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF417Q8TAU3 575 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 STK35Q8TDR2 534 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF587Q96SQ5 575 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 EMC6Q9BV81 110 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 SLITRK2Q9H156 845 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 HINT3Q9NQE9 182 aaKnown RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 MED29Q9NX70 200 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 PDP1Q9P0J1 537 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 SLC17A7Q9P2U7 560 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 SOX21Q9Y651 276 aaPredicted RBP16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 DSPPQ9NZW4 1301 aa16.16■□□□□ 0.18
HMGCS1-206ENST00000511774 IGHV1-69-2A0A0G2JMI3 117 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 POM121CA8CG34 1229 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 AHSA1O95433 338 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 RNASE1P07998 156 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 CDKN2CP42773 168 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 RPS23P62266 143 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 IL13RA1P78552 427 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 HOXC5Q00444 222 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 MFSD13AQ14CX5 517 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 NKPD1Q17RQ9 610 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 LEG1Q6P5S2 330 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 NHLRC1Q6VVB1 395 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 USP51Q70EK9 711 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 SERPINA11Q86U17 422 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 PIK3C3Q8NEB9 887 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 BHLHE22Q8NFJ8 381 aaPredicted RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 PNPT1Q8TCS8 783 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 TAAR8Q969N4 342 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 PPP1R36Q96LQ0 422 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 DPY30Q9C005 99 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 MMP26Q9NRE1 261 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 NOP53Q9NZM5 478 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 ZNF346Q9UL40 294 aaKnown RBP16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 TANC2Q9HCD6 1990 aa16.15■□□□□ 0.18
HMGCS1-206ENST00000511774 IGLV3-9A0A075B6K5 115 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 FAM157BP0CG42 384 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 RAB1AP62820 205 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 WHAMMP3Q1A5X7 153 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 OR52P1PQ8NH57 321 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 EPS8L3Q8TE67 593 aaKnown RBP16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 TXNDC15Q96J42 360 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 LEF1Q9UJU2 399 aaPredicted RBP16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 MID2Q9UJV3 735 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 ZNF281Q9Y2X9 895 aa16.14■□□□□ 0.17
HMGCS1-206ENST00000511774 MS4A18H0YCH9 400 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 NR2F1P10589 423 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 CCL2P13500 99 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 CBLP22681 906 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 OMGP23515 440 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 GATA3P23771 443 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 GALK2Q01415 458 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 BAMBIQ13145 260 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 C1DQ13901 141 aaKnown RBP16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 GNA13Q14344 377 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 SLC9A3R2Q15599 337 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 MS4A18Q3C1V0 323 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 ANXA8L1Q5VT79 327 aa16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 RBMS3Q6XE24 437 aaKnown RBP16.13■□□□□ 0.17
HMGCS1-206ENST00000511774 PEX5LQ8IYB4 626 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms