RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 IGFL2Q6UWQ7 119 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 EXD3Q8N9H8 876 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 OR2T27Q8NH04 317 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 HAVCR2Q8TDQ0 301 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 C12orf43Q96C57 262 aaKnown RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ZHX1-C8orf76Q96EF9 292 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 KLHL15Q96M94 604 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 CNN2Q99439 309 aaKnown RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ZNF703Q9H7S9 590 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 MED20Q9H944 212 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ADGRL4Q9HBW9 690 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 DEPPQ9NTK1 212 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ERVK13-1Q9NX77 482 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 RASD1Q9Y272 281 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 PRSS37A4D1T9 235 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 AQP7P3A6NL99 342 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 CENPBD1B2RD01 187 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 NPIPA5E9PKD4 350 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 C11orf98E9PRG8 122 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 MS4A18H0YCH9 400 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 SULT2B1O00204 365 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 NKX2-8O15522 239 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 HPNP05981 417 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 LIMS3P0CW19 117 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 LIMS4P0CW20 117 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 NR2C1P13056 603 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 CRABP1P29762 137 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 RGS6P49758 472 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ETV1P50549 477 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 B3GALT5-AS1P59052 145 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ACTA2P62736 377 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ACTG2P63267 376 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 HSF1Q00613 529 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 GALEQ14376 348 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 POU4F3Q15319 338 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 MS4A18Q3C1V0 323 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 TMEM176BQ3YBM2 270 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 C19orf48Q6RUI8 117 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 GDPGP1Q6ZNW5 385 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 LINC00696Q6ZRV3 163 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ESPNLQ6ZVH7 1005 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ATP6V1C2Q8NEY4 427 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 OR4F15Q8NGB8 312 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 OR14L1PQ8NHC6 308 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 SCMH1Q96GD3 660 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 SIGLEC12Q96PQ1 595 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 NAA11Q9BSU3 229 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 MFRPQ9BY79 579 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 ZNF552Q9H707 407 aaPredicted RBP13.66□□□□□ -0.22
SCLT1-209ENST00000511426 SEC14L4Q9UDX3 406 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 NPIPA1Q9UND3 350 aa13.66□□□□□ -0.22
SCLT1-209ENST00000511426 C12orf71A8MTZ7 269 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 SHISA8B8ZZ34 492 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 G3V3Y1 287 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 AKAP8O43823 692 aaKnown RBP13.65□□□□□ -0.22
SCLT1-209ENST00000511426 CEACAM4O75871 244 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 BCL10O95999 233 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ADRA2AP08913 450 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 GDF1P27539 372 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ACVR1BP36896 505 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 TGFBR2P37173 567 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 OR2B6P58173 313 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 TAS2R43P59537 309 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 H3F3AP84243 136 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 EEF1A1P5Q5VTE0 462 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ZBTB46Q86UZ6 589 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 FAM83FQ8NEG4 500 aaPredicted RBP13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ASB10Q8WXI3 467 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ADAD1Q96M93 576 aaKnown RBP13.65□□□□□ -0.22
SCLT1-209ENST00000511426 OXGR1Q96P68 337 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 OR5M11Q96RB7 305 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ARHGAP9Q9BRR9 750 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ZNF649Q9BS31 505 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 ASB6Q9NWX5 421 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 TAS2R16Q9NYV7 291 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 CLEC2DQ9UHP7 191 aa13.65□□□□□ -0.22
SCLT1-209ENST00000511426 A0A0G2JMM0 328 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 A0A1W2PPB8 328 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 A0A1W2PRS3 328 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 DAPL1A0PJW8 107 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 KIR3DP1A8MWS1 328 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 DLL1O00548 723 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 ARHGEF9O43307 516 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 PRKAR1AP10644 381 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SFTPDP35247 375 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 LIPAP38571 399 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 P2RY4P51582 365 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 RAC3P60763 192 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 ARG2P78540 354 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 GPR50Q13585 617 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 TOMM20Q15388 145 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 PDSS1Q5T2R2 415 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 LINC01590Q5TEZ4 76 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SLC16A12Q6ZSM3 486 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SULF2Q8IWU5 870 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 UEVLDQ8IX04 471 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SYS1Q8N2H4 156 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 ZFP62Q8NB50 900 aaPredicted RBP13.64□□□□□ -0.23
SCLT1-209ENST00000511426 ZNF485Q8NCK3 441 aa13.64□□□□□ -0.23
SCLT1-209ENST00000511426 SNIP1Q8TAD8 396 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms