RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 CLOCKO15516 846 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 OR10H3O60404 316 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 FKBP6O75344 327 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 ADAP00813 363 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 IGHV3-9P01782 118 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 HLA-DOBP13765 273 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 EDNRAP25101 427 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 COL8A1P27658 744 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 NTF4P34130 210 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 AQP2P41181 271 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 KIR2DL3P43628 341 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 OMPP47874 163 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 LIMS1P48059 325 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 SELENOPP49908 381 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 HMGA2P52926 109 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 PRPS1P60891 318 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 LSM11P83369 360 aaKnown RBP eCLIP11.36□□□□□ -0.59
COL6A6-203ENST00000511332 FAM27E3Q08E93 113 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 FAPQ12884 760 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 ITGADQ13349 1161 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 ALG10Q5BKT4 473 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 TSPO2Q5TGU0 170 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 SLC35D2Q76EJ3 337 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 CXorf67Q86X51 503 aaPredicted RBP11.36□□□□□ -0.59
COL6A6-203ENST00000511332 STEAP2Q8NFT2 490 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 OR2M2Q96R28 347 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 USB1Q9BQ65 265 aaKnown RBP11.36□□□□□ -0.59
COL6A6-203ENST00000511332 LINC00470Q9BZP3 86 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 B3GAT2Q9NPZ5 323 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 SLC7A10Q9NS82 523 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 CCM2LQ9NUG4 571 aaPredicted RBP11.36□□□□□ -0.59
COL6A6-203ENST00000511332 MED29Q9NX70 200 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 TAS2R16Q9NYV7 291 aa11.36□□□□□ -0.59
COL6A6-203ENST00000511332 SAMHD1Q9Y3Z3 626 aaKnown RBP11.36□□□□□ -0.59
COL6A6-203ENST00000511332 ASH1LQ9NR48 2969 aaKnown RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 TRAV27A0A087WT01 109 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ZNF726A6NNF4 738 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 GNGT2O14610 69 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 CDC42EP2O14613 210 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ZNF432O94892 652 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 CCNB2O95067 398 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 BCL10O95999 233 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 F13BP05160 661 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 IFNGR1P15260 489 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 IGHV1-2P23083 117 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 FPR3P25089 353 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 DNAJA1P31689 397 aaKnown RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ERFP50548 548 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 BIDP55957 195 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 TGFBR3Q03167 851 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ZBED5Q49AG3 693 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 SFRP5Q5T4F7 317 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 BHLHA15Q7RTS1 189 aaPredicted RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 SSX8Q7RTT4 187 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 MEX3DQ86XN8 651 aaKnown RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 TMEM123Q8N131 208 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 GPR137CQ8N3F9 429 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 PAPD5Q8NDF8 572 aaKnown RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 C1orf162Q8NEQ5 155 aaPredicted RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 OR4C15Q8NGM1 316 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 OR6X1Q8NH79 312 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 FAM222BQ8WU58 562 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 UTP4Q969X6 686 aaKnown RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 DACH2Q96NX9 599 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ALKBH3Q96Q83 286 aaPredicted RBP11.35□□□□□ -0.59
COL6A6-203ENST00000511332 MED18Q9BUE0 208 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 ACTR6Q9GZN1 396 aa11.35□□□□□ -0.59
COL6A6-203ENST00000511332 PKDREJQ9NTG1 2253 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 HECTD1Q9ULT8 2610 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 SLC35F4A4IF30 521 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 UNC119BA6NIH7 251 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 PDLIM1O00151 329 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 KLF4O43474 513 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 DEAF1O75398 565 aaPredicted RBP11.34□□□□□ -0.59
COL6A6-203ENST00000511332 LYZL6O75951 148 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 GOSR1O95249 250 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 IGHG1P01857 330 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 IGHMP01871 453 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 FCGR1AP12314 374 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 NR2C1P13056 603 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 MPGP29372 298 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 HOXC12P31275 282 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 RPL4P36578 427 aaKnown RBP11.34□□□□□ -0.59
COL6A6-203ENST00000511332 SH3BGRP55822 239 aaPredicted RBP11.34□□□□□ -0.59
COL6A6-203ENST00000511332 CCNIQ14094 377 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 MELKQ14680 651 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 FAM205BPQ63HN1 556 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 OR7E24Q6IFN5 339 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 ZNF433Q8N7K0 673 aaPredicted RBP11.34□□□□□ -0.59
COL6A6-203ENST00000511332 OR51A7Q8NH64 312 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 MOSPD2Q8NHP6 518 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 FANK1Q8TC84 345 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 GNPDA2Q8TDQ7 276 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 ZNF566Q969W8 418 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 MARVELD3Q96A59 401 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
COL6A6-203ENST00000511332 LRR1Q96L50 414 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 TXNIPQ9H3M7 391 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 MCCC2Q9HCC0 563 aa11.34□□□□□ -0.59
COL6A6-203ENST00000511332 ZNF226Q9NYT6 803 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms