RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 MFAP5Q13361 173 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 IKZF1Q13422 519 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 SLC36A2Q495M3 483 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 ZMAT1Q5H9K5 638 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 LYSMD4Q5XG99 296 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 WDR5BQ86VZ2 330 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 CNEP1R1Q8N9A8 125 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 LINC01599Q8WXQ3 324 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 SLC6A18Q96N87 628 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 MYH13Q9UKX3 1938 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 TMED7Q9Y3B3 224 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 EMC9Q9Y3B6 208 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 P2RY10O00398 339 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 UTS2O95399 124 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PMS2P2O95744 297 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 ZNF728P0DKX0 622 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PTBP1P26599 531 aaKnown RBP eCLIP9.8□□□□□ -0.844e-7■■■■□ 20.3
NEK1-206ENST00000510533 GJA4P35212 333 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PTGER4P35408 488 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 GABRA2P47869 451 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 CCR9P51686 369 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 HSD17B7P56937 341 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PFN3P60673 137 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 CAMK2BQ13554 666 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 C9orf135Q5VTT2 229 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 FAM71E1Q6IPT2 247 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 FAM3DQ96BQ1 224 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PKMYT1Q99640 499 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 TUBB1Q9H4B7 451 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 PRSS16Q9NQE7 514 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 BOLA1Q9Y3E2 137 aa9.8□□□□□ -0.84
NEK1-206ENST00000510533 LOC100289279A0A1B0GTE1 492 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 FUCA1P04066 466 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 DPP4P27487 766 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 THBS3P49746 956 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 HBG1P69891 147 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 HBG2P69892 147 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SLC35A1P78382 337 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 ATPAF1Q5TC12 328 aaPredicted RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 SLC48A1Q6P1K1 146 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 FAM122CQ6P4D5 195 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 ADAMTSL4Q6UY14 1074 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 VASH1Q7L8A9 365 aaPredicted RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 KDM8Q8N371 416 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 OR5D18Q8NGL1 313 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SECTM1Q8WVN6 248 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 NAT6Q93015 286 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 RBPMSQ93062 196 aaKnown RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 TEX37Q96LM6 180 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 MYOTQ9UBF9 498 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 MUTYHQ9UIF7 546 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 KDM3BQ7LBC6 1761 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 M0QYG6 137 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 CYB5BO43169 146 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SLCO2B1O94956 709 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 NSA2O95478 260 aaKnown RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 SCGB1D1O95968 90 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 PDGFAP04085 211 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SMIM18P0DKX4 95 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 BCKDHBP21953 392 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 F2RL1P55085 397 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 DEFA6Q01524 100 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 CDKN3Q16667 212 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SLC35D3Q5M8T2 416 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SHEQ5VZ18 495 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 CD276Q5ZPR3 534 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 LINC00299Q6ZSB3 139 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 MED25Q71SY5 747 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 AAED1Q7RTV5 226 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 MDGA2Q7Z553 956 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 ADGRE4PQ86SQ3 457 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 EID2Q8N6I1 236 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 HSD17B8Q92506 261 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 DVL3Q92997 716 aaPredicted RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 LCORQ96JN0 433 aaPredicted RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 EPHX3Q9H6B9 360 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 DNMT3BQ9UBC3 853 aaKnown RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 HCSTQ9UBK5 93 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SRMP19623 302 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 PCSK6P29122 969 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SERPINF1P36955 418 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 RPS19P39019 145 aaKnown RBP9.79□□□□□ -0.84
NEK1-206ENST00000510533 MEP1BQ16820 701 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 RNLSQ5VYX0 342 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 S100A7AQ86SG5 101 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 NANOGP1Q8N7R0 232 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 NKAIN3Q8N8D7 197 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 DMBX1Q8NFW5 382 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 OR6M1Q8NGM8 313 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 ZIC5Q96T25 663 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 UBQLN3Q9H347 655 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 FKRPQ9H9S5 495 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 NPFFR2Q9Y5X5 522 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 CD14P08571 375 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SLC35E2P0CK97 266 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 CPT2P23786 658 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 BIDP55957 195 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 XKR7Q5GH72 579 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 SOHLH1Q5JUK2 328 aa9.79□□□□□ -0.84
NEK1-206ENST00000510533 AVPI1Q5T686 147 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms