RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 ACSM3Q53FZ2 586 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 TMEM205Q6UW68 189 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 OR2T27Q8NH04 317 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 THEM6Q8WUY1 208 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 ADAD1Q96M93 576 aaKnown RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 OR14A2Q96R54 314 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 GPX7Q96SL4 187 aaPredicted RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 ZNF160Q9HCG1 818 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 COL5A1P20908 1838 aaPredicted RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 A0A0B4J203 849 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 FABP12A6NFH5 140 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 ANKRD61A6NGH8 418 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 KLF7O75840 302 aaPredicted RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 PAHP00439 452 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 OTX2P32243 289 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 DDI2Q5TDH0 399 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 GPALPP1Q8IXQ4 340 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 INPP5EQ9NRR6 644 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 INIPQ9NRY2 104 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 MED29Q9NX70 200 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 ST6GALNAC2Q9UJ37 374 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 URB1O60287 2271 aaKnown RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 IQCMA0A1B0GVH7 501 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 SLC16A7O60669 478 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 RAD1O60671 282 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 TMCC2O75069 709 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 GBX2P52951 348 aaPredicted RBP13.44□□□□□ -0.26
PHF3-209ENST00000509330 WDFY1Q8IWB7 410 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 POMGNT2Q8NAT1 580 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 CMKLR1Q99788 373 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 HS3ST3B1Q9Y662 390 aa13.44□□□□□ -0.26
PHF3-209ENST00000509330 A0A1W2PNR3 127 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 ACOD1A6NK06 481 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 RENP00797 406 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 SFTPDP35247 375 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 NANOS3P60323 173 aaKnown RBP13.43□□□□□ -0.26
PHF3-209ENST00000509330 PYDC2Q56P42 97 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 SLC39A7Q92504 469 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 C5orf34Q96MH7 638 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 ATF6BQ99941 703 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 EMC6Q9BV81 110 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 B3GAT2Q9NPZ5 323 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 GTF2A1LQ9UNN4 478 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 LOXL2Q9Y4K0 774 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 PLPP2O43688 288 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 DOK2O60496 412 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 APEX1P27695 318 aaKnown RBP13.43□□□□□ -0.26
PHF3-209ENST00000509330 HOXD12P35452 270 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 BCAP31P51572 246 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 SIRPAP78324 504 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 FMODQ06828 376 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 P2RY14Q15391 338 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 SLC25A35Q3KQZ1 300 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 ZBTB44Q8NCP5 570 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 CCNL2Q96S94 520 aaPredicted RBP13.43□□□□□ -0.26
PHF3-209ENST00000509330 AMELYQ99218 206 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 SLC25A18Q9H1K4 315 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 KCNN2Q9H2S1 579 aa13.43□□□□□ -0.26
PHF3-209ENST00000509330 EML6Q6ZMW3 1958 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 STK17BO94768 372 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 MPZL1O95297 269 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 ZNF41P51814 821 aaPredicted RBP13.42□□□□□ -0.26
PHF3-209ENST00000509330 ZNF181Q2M3W8 571 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 DMKNQ6E0U4 476 aaPredicted RBP13.42□□□□□ -0.26
PHF3-209ENST00000509330 TUBA3EQ6PEY2 450 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 YIPF7Q8N8F6 280 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 LIPHQ8WWY8 451 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 TMEM234Q8WY98 164 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 KCNG2Q9UJ96 466 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 LAMP5Q9UJQ1 280 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 NOX1Q9Y5S8 564 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 LOC400499M0QZD8 3231 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 ANKUB1A6NFN9 424 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 EFNA2O43921 213 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 CBFA2T3O75081 653 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 NPIPB7O75200 414 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 LCN1P31025 176 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 MC2RQ01718 297 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 POU3F1Q03052 451 aaPredicted RBP13.42□□□□□ -0.26
PHF3-209ENST00000509330 CDK5R1Q15078 307 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 SGCBQ16585 318 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 CNIH2Q6PI25 160 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 RDH10Q8IZV5 341 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 SLC43A2Q8N370 569 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 SPACA9Q96E40 222 aaPredicted RBP13.42□□□□□ -0.26
PHF3-209ENST00000509330 SLC26A1Q9H2B4 701 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 CDCP1Q9H5V8 836 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 WIF1Q9Y5W5 379 aa13.42□□□□□ -0.26
PHF3-209ENST00000509330 IGHV1-45A0A0A0MS14 117 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 IDH3BO43837 385 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 COX6A1P12074 109 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 CTLA4P16410 223 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 PTGDSP41222 190 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 CASP3P42574 277 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 SOX2P48431 317 aa13.41□□□□□ -0.26
PHF3-209ENST00000509330 ACTA2P62736 377 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms