RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 CDONQ4KMG0 1287 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 EIPR1Q53HC9 387 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DCST2Q5T1A1 773 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 NIPAL3Q6P499 406 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SEZ6L2Q6UXD5 910 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 TMPPEQ6ZT21 453 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ZDHHC13Q8IUH4 622 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PRSS58Q8IYP2 241 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 OR4N4Q8N0Y3 316 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 CADM3Q8N126 398 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 TMEM251Q8N6I4 163 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 OR5M9Q8NGP3 310 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MUS81Q96NY9 551 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MAP3K3Q99759 626 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 TRIM51Q9BSJ1 452 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SLC25A19Q9HC21 320 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 FBXO8Q9NRD0 319 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 YARS2Q9Y2Z4 477 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 FAM90A7PA6NKC0 464 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 GABRR3A8MPY1 467 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 FAM90A22PA8MWA6 464 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 FAM90A12PA8MX19 464 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 FAM90A23PA8MXZ1 464 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 M0QZQ0 153 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SLC30A4O14863 429 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 CHADO15335 359 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 EFSO43281 561 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 KDELR3O43731 214 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 NSA2O95478 260 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 OR10J4P0C629 311 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 CCL2P13500 99 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MYL12AP19105 171 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 AGAP20933 346 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PRPS1L1P21108 318 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 TUBG1P23258 451 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PYCR1P32322 319 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 POU3F4P49335 361 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MRPS10P82664 201 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SPHARQ15513 63 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 GOLGA7BQ2TAP0 167 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RFTN2Q52LD8 501 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 GCSAMLQ5JQS6 135 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DCAF12Q5T6F0 453 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ACSM5Q6NUN0 579 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PAQR3Q6TCH7 311 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ASB18Q6ZVZ8 466 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 H2BFWTQ7Z2G1 175 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MRPL52Q86TS9 123 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ALYREFQ86V81 257 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 NAGSQ8N159 534 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PRSS35Q8N3Z0 413 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DUSP18Q8NEJ0 188 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 OR10S1Q8NGN2 331 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 OR1B1Q8NGR6 318 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 WIPF2Q8TF74 440 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 C16orf78Q8WTQ4 265 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 EME1Q96AY2 570 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SGTBQ96EQ0 304 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 CPNE2Q96FN4 548 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RMND5BQ96G75 393 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 C20orf173Q96LM9 149 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RBP7Q96R05 134 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 IL12RB2Q99665 862 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ELOVL4Q9GZR5 314 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RACGAP1Q9H0H5 632 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PPP1R3EQ9H7J1 279 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 TUBG2Q9NRH3 451 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PPP4R1LQ9P1A2 415 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ABI3Q9P2A4 366 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DIMT1Q9UNQ2 313 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SELENOKQ9Y6D0 94 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MICAL3Q7RTP6 2002 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 A0A1W2PR48 441 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 LRP5LA4QPB2 252 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 LYRM9A8MSI8 78 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SLC1A7O00341 560 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF821O75541 412 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DEDDO75618 318 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MT-ND2P03891 347 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PTPN4P29074 926 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SOX2P48431 317 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RAB9AP51151 201 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF84P51523 738 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 UGT2B15P54855 530 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ELLP55199 621 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 SLC25A11Q02978 314 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 MVKQ03426 396 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RHEBQ15382 184 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ACCSLQ4AC99 568 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 PNCKQ6P2M8 343 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 RFWD3Q6PCD5 774 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 UGT2A3Q6UWM9 527 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 KYAT3Q6YP21 454 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ZNF554Q86TJ5 538 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 ZDHHC23Q8IYP9 409 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 DCP1BQ8IZD4 617 aaKnown RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 VKORC1L1Q8N0U8 176 aa3.57□□□□□ -1.84
NEDD4-209ENST00000508871 C12orf76Q8N812 135 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 C2CD4AQ8NCU7 369 aaPredicted RBP3.57□□□□□ -1.84
NEDD4-209ENST00000508871 APH1BQ8WW43 257 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms