RNA–Protein interactions for RNA: ENST00000508809.1

COL4A3BP-206, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 2

Gene COL4A3BP, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-206ENST00000508809 GPIP06744 558 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CECR9P0C854 216 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 DAOP14920 347 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 TACR3P29371 465 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CALCRP30988 508 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 COMPP49747 757 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 KHKP50053 298 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 DVL1P1P54792 670 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CDH15P55291 814 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 POU3F1Q03052 451 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 HGFACQ04756 655 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 MAD2L1Q13257 205 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CEACAM7Q14002 265 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 GSTA3Q16772 222 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 TMEM177Q53S58 311 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 OTUD3Q5T2D3 398 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 TNFAIP8L2Q6P589 184 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 C12orf54Q6X4T0 127 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CREB3L2Q70SY1 520 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 LINGO2Q7L985 606 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 NUDT10Q8NFP7 164 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 RAB8BQ92930 207 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 TUBGCP3Q96CW5 907 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 NEURL3Q96EH8 262 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 NUDT11Q96G61 164 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 ZIM3Q96PE6 472 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 TRNT1Q96Q11 434 aaKnown RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 KCNS3Q9BQ31 491 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 MECRQ9BV79 373 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 SLC38A1Q9H2H9 487 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 NELFAQ9H3P2 528 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 MTHFD2LQ9H903 347 aaPredicted RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 MOV10Q9HCE1 1003 aaKnown RBP7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 MEGF8Q7Z7M0 2845 aa7.43□□□□□ -1.22
COL4A3BP-206ENST00000508809 CFAP73A6NFT4 308 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 VSTM5A8MXK1 200 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 ZNF587BE7ETH6 402 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 RPL36A-HNRNPH2H7BZ11 118 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 hCG_2039718K7EN88 272 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 HMGN4O00479 90 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 NR5A2O00482 541 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SPRY1O43609 319 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SNUPNO95149 360 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 LGI1O95970 557 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 CBR1P16152 277 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 CDH2P19022 906 aaPredicted RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 NPR2P20594 1047 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 RPS4Y1P22090 263 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 APEX1P27695 318 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 THBS4P35443 961 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SRP14P37108 136 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SELENOPP49908 381 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 UBE2NP61088 152 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 EPS8Q12929 822 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 CASP8Q14790 479 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 ANXA8L1Q5VT79 327 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 LRRC74BQ6ZQY2 392 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 ZCCHC23Q6ZST2 131 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 EPHX4Q8IUS5 362 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 ZCCHC24Q8N2G6 241 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 EIF1ADQ8N9N8 165 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 HIPK4Q8NE63 616 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SEMA6DQ8NFY4 1073 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 OR4A15Q8NGL6 344 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 AGR3Q8TD06 166 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 AJUBAQ96IF1 538 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 ANKRD27Q96NW4 1050 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 KRTAP4-7Q9BYR0 210 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 LINC00470Q9BZP3 86 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 SEC61A2Q9H9S3 476 aa7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
COL4A3BP-206ENST00000508809 B4DSR2 109 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 NPIPB7O75200 414 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 UPK3AO75631 287 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 ZNF432O94892 652 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 CPSF4O95639 269 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 C1QCP02747 245 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 ERCC1P07992 297 aaPredicted RBP7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 CHRM4P08173 479 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 NUDT17P0C025 328 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 EGR1P18146 543 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 PCMT1P22061 227 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 CXCR1P25024 350 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 ACAA2P42765 397 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 EVX1P49640 407 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 SH3BGRP55822 239 aaPredicted RBP7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 TXNL4AP83876 142 aaKnown RBP7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 LGALS3BPQ08380 585 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 OR7A5Q15622 319 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 TRIP10Q15642 601 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 SYPL1Q16563 259 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 FAM174BQ3ZCQ3 159 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 GPAT3Q53EU6 434 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 TMEM225Q6GV28 225 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 HMGN2P46Q86SG4 172 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 GPAT4Q86UL3 456 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 ANKRD46Q86W74 232 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 ANKFN1Q8N957 763 aa7.41□□□□□ -1.22
COL4A3BP-206ENST00000508809 VPS37AQ8NEZ2 397 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms