RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 TMEM71Q6P5X7 295 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 LINC00114Q6XXX2 140 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SIAH3Q8IW03 269 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CCDC28AQ8IWP9 274 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC38A9Q8NBW4 561 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM98AQ8NCA5 519 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 C17orf47Q8NEP4 570 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 OR8H1Q8NGG4 311 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 OR14A16Q8NHC5 309 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SMIM4Q8WVI0 70 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TNFRSF13CQ96RJ3 184 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 DPYSL5Q9BPU6 564 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 G6PC3Q9BUM1 346 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 PLEKHA1Q9HB21 404 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 BRD7Q9NPI1 651 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MKKSQ9NPJ1 570 aaPredicted RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SUSD2Q9UGT4 822 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SCP2D1Q9UJQ7 156 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ICAM5Q9UMF0 924 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TRAV6A0A075B6T7 132 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TEX51A0A1B0GUA7 166 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1B0GWA3 101 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SYNDIG1LA6NDD5 238 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TRABD2BA6NFA1 517 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC22A5O76082 557 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TIAF1O95411 115 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CRYZL1O95825 349 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 IFNA7P01567 189 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 RAF1P04049 648 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MRPL3P09001 348 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SP9P0CG40 484 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SULT1A3P0DMM9 295 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SULT1A4P0DMN0 295 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 GIFP27352 417 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ACAA2P42765 397 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 DIO1P49895 249 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SNRPD2P62316 118 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CCL7P80098 99 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 NR0B2Q15466 257 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 NSDHLQ15738 373 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 GSG1Q2KHT4 349 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF528Q3MIS6 628 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TEX261Q6UWH6 196 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 IL20RBQ6UXL0 311 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 DPY19L2P2Q6ZN68 376 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MED25Q71SY5 747 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 KCTD20Q7Z5Y7 419 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 KMT5CQ86Y97 462 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 OR5H6Q8NGV6 325 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 OR5J2Q8NH18 312 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF671Q8TAW3 534 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SNX33Q8WV41 574 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ERMAPQ96PL5 475 aaPredicted RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CITED4Q96RK1 184 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MESP1Q9BRJ9 268 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 PELOQ9BRX2 385 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 NXF5Q9H1B4 397 aaKnown RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CLEC4MQ9H2X3 399 aaPredicted RBP10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 ZFP64Q9NPA5 681 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 RPS6KB2Q9UBS0 482 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 CHRNA9Q9UGM1 479 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC23A1Q9UHI7 598 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MKL2Q9ULH7 1088 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 MMACHCQ9Y4U1 282 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 U3KQ87 197 aa10.04□□□□□ -0.8
SH3RF1-203ENST00000508685 TRAV27A0A087WT01 109 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ARPC4-TTLL3A0A0A6YYG9 625 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 A0A1W2PQ72 361 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 TCRBV16S1A1N1A0A5B0 115 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ARPC3O15145 178 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 SHOXO15266 292 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 DDAH2O95865 285 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 IGKV3-11P04433 115 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 NGFRP08138 427 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ATF1P18846 271 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 GALNSP34059 522 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 NHLH1Q02575 133 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 DBPQ10586 325 aaPredicted RBP10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 KLF9Q13886 244 aaPredicted RBP10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 FGFBP1Q14512 234 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF141Q15928 474 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ALG10BQ5I7T1 473 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 CEP78Q5JTW2 689 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ELFN2Q5R3F8 820 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 FAM27D1Q5T7N8 215 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 LANCL3Q6ZV70 420 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 SLC35F2Q8IXU6 374 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 GATSQ8NAP1 163 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ZNF527Q8NB42 609 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 OR11H7Q8NGC8 314 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 OR52E2Q8NGJ4 325 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 SGTBQ96EQ0 304 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 ZFP3Q96NJ6 502 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 SORCS2Q96PQ0 1159 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 GAL3ST4Q96RP7 486 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 NRSN2Q9GZP1 204 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 VN1R1Q9GZP7 353 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 MCCC2Q9HCC0 563 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 PRODH2Q9UF12 536 aa10.03□□□□□ -0.8
SH3RF1-203ENST00000508685 AUP1Q9Y679 476 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms