RNA–Protein interactions for RNA: ENST00000508580.1

DDX4-208, Transcript of DEAD-box helicase 4, human

TSL 2

Gene DDX4, Length 600 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX4-208	ENST00000508580		A0A1B0GUS0	222 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	PRSS37	A4D1T9	235 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OR5H15	A6NDH6	313 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	MGAT4D	A6NG13	374 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580		E7EWF7	191 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	NDUFAB1	O14561	156 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ATP6V0E1	O15342	81 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SIGLEC5	O15389	551 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	RGS16	O15492	202 aa	Predicted RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	PRKN	O60260	465 aa	Predicted RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ATP5H	O75947	161 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	AP2A2	O94973	939 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CCNB2	O95067	398 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	VAPB	O95292	243 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	FARS2	O95363	451 aa	Known RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OAS1	P00973	400 aa	Known RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CST4	P01036	141 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	IGHG4	P01861	327 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	RPN2	P04844	631 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	NR2C1	P13056	603 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ATP5A1	P25705	553 aa	Known RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	GIF	P27352	417 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	UBE2G2	P60604	165 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ABCE1	P61221	599 aa	Known RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	TSPAN5	P62079	268 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	RAB40B	Q12829	278 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SLAMF1	Q13291	335 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SLC17A1	Q14916	467 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ZNF74	Q16587	644 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CCDC14	Q49A88	953 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	FAM106A	Q4KMX7	169 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SLC22A6	Q4U2R8	563 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ZC2HC1B	Q5TFG8	222 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	FAM53A	Q6NSI3	398 aa	Predicted RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	FAM122B	Q7Z309	247 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	LINC01561	Q8N1V8	128 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CYB561A3	Q8NBI2	242 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OR4D9	Q8NGE8	314 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	NUBPL	Q8TB37	319 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	PLPPR1	Q8TBJ4	325 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	TCP10L	Q8TDR4	215 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	TMEM190	Q8WZ59	177 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	TBRG4	Q969Z0	631 aa	Known RBP eCLIP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OMA1	Q96E52	524 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ZNF641	Q96N77	438 aa	Predicted RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	ATP5S	Q99766	215 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CTRC	Q99895	268 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CHID1	Q9BWS9	393 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	PAPOLG	Q9BWT3	736 aa	Known RBP	3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	RAB34	Q9BZG1	259 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OR51M1	Q9H341	326 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	PRSS16	Q9NQE7	514 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	CUTC	Q9NTM9	273 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	STMN3	Q9NZ72	180 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SLC17A7	Q9P2U7	560 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	KIF25	Q9UIL4	384 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	DDX19B	Q9UMR2	479 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	SCML2	Q9UQR0	700 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	OARD1	Q9Y530	152 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	GMPPB	Q9Y5P6	360 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	KIF1A	Q12756	1690 aa		3.2	□□□□□ -1.9
DDX4-208	ENST00000508580	YTHDC2	Q9H6S0	1430 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	PHRF1	Q9P1Y6	1649 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	hCG_38984	A0A1B0GV85	526 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580		A0A1B0GW15	77 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	RNASEK-C17orf49	H0YIS7	233 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	SLC1A7	O00341	560 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ENTPD5	O75356	428 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	HSBP1	O75506	76 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	TSPAN13	O95857	204 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	FADS2	O95864	444 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	HLA-H	P01893	362 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	IFNW1	P05000	195 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ZNF853	P0CG23	659 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	PRSS56	P0CW18	603 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	GATA1	P15976	413 aa	Predicted RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	GABRR2	P28476	465 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	HOXA9	P31269	272 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	RPL4	P36578	427 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	SLC26A3	P40879	764 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	MAP3K8	P41279	467 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	RGR	P47804	291 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	OR3A2	P47893	321 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ZFP36L2	P47974	494 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	STK19	P49842	368 aa	Predicted RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	EMP2	P54851	167 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	OR2B6	P58173	313 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ADARB1	P78563	741 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	BASP1	P80723	227 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	FADD	Q13158	208 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ORC2	Q13416	577 aa	Predicted RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	EIF2B1	Q14232	305 aa	Known RBP	3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	PON2	Q15165	354 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	RAB35	Q15286	201 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	ISX	Q2M1V0	245 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	RGS21	Q2M5E4	152 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	HLA-B	Q31612	363 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	TMEM52B	Q4KMG9	183 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	TECRL	Q5HYJ1	363 aa		3.19	□□□□□ -1.9
DDX4-208	ENST00000508580	CDKL4	Q5MAI5	379 aa		3.19	□□□□□ -1.9

Retrieved 100 of 20,778 RNA–protein pairs in 70 ms