RNA–Protein interactions for RNA: ENST00000508524.1

TOPBP1-206, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 618 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-206ENST00000508524 NUP210Q8TEM1 1887 aaPredicted RBP3.01□□□□□ -1.93
TOPBP1-206ENST00000508524 ZFC3H1O60293 1989 aaKnown RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 PLEKHA8P1O95397 391 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 KLF8O95600 359 aaPredicted RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 IGHV4-34P06331 123 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 OR4Q2P0C623 313 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 BCKDHAP12694 445 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 TSPAN8P19075 237 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 HNRNPA2B1P22626 353 aaKnown RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 NMT1P30419 496 aaKnown RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 KIF5BP33176 963 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 ACADVLP49748 655 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 APOC4P55056 127 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 NUMA1Q14980 2115 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 CEP55Q53EZ4 464 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 DNM1P46Q6ZS02 220 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 LCA5Q86VQ0 697 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 ITPRIPQ8IWB1 547 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 FAM9BQ8IZU0 186 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 KIR2DL5BQ8NHK3 375 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF461Q8TAF7 563 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 TRUB1Q8WWH5 349 aaKnown RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 KRT35Q92764 455 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 VMP1Q96GC9 406 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 NARFLQ9H6Q4 476 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 SH2D2AQ9NP31 389 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 ASCL3Q9NQ33 180 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF223Q9UK11 482 aaPredicted RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 DNPEPQ9ULA0 475 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 MAB21L2Q9Y586 359 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 TMEM131Q92545 1883 aa3□□□□□ -1.93
TOPBP1-206ENST00000508524 MYO18AQ92614 2054 aaKnown RBP3□□□□□ -1.93
TOPBP1-206ENST00000508524 LOC100131303A0A0U1RQF7 123 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 FAM166BA8MTA8 275 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF705EA8MWA4 302 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 CASC3O15234 703 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF324O75467 553 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 FOXH1O75593 365 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 AKR7A3O95154 331 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ARF4P18085 180 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 XRCC1P18887 633 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 GABRR2P28476 465 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 AXLP30530 894 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 PRDX2P32119 198 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 CSNK1EP49674 416 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 PFN3P60673 137 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 C1orf186Q6ZWK4 172 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 FAM220AQ7Z4H9 259 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 VPS36Q86VN1 386 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF561Q8N587 486 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 TMEM252Q8N6L7 170 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 HTR3CQ8WXA8 447 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ESR2Q92731 530 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ELMO2Q96JJ3 720 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 RNF126Q9BV68 326 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 COMMD4Q9H0A8 199 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 LINC00597Q9H2U6 94 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ECT2Q9H8V3 914 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 PSTPIP2Q9H939 334 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 PAK1IP1Q9NWT1 392 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 WRAP73Q9P2S5 460 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 APPL1Q9UKG1 709 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 PSG11Q9UQ72 335 aa2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 MYH9P35579 1960 aaKnown RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 COL27A1Q8IZC6 1860 aaPredicted RBP2.99□□□□□ -1.93
TOPBP1-206ENST00000508524 ZANQ9Y493 2812 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 IGKV2-28A0A075B6P5 120 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 B3GAT3O94766 335 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 INSP01308 110 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 IGKV2D-28P01615 120 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 RCC1P18754 421 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 ATF6P18850 670 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 PRDX6P30041 224 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 HPDP32754 393 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 GNPDA1P46926 289 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 ACTN3Q08043 901 aaPredicted RBP2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 LAMTOR4Q0VGL1 99 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 FUT7Q11130 342 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 KDM7AQ6ZMT4 941 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 CYS1Q717R9 158 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 PLA2G4DQ86XP0 818 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 EFCAB13Q8IY85 973 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 CMTM8Q8IZV2 173 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 OR52E1Q8NGJ3 308 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 CABS1Q96KC9 395 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 ARHGDIGQ99819 225 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 IL20RAQ9UHF4 553 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 ZNF225Q9UK10 706 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 TLN2Q9Y4G6 2542 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 ANK1P16157 1881 aa2.98□□□□□ -1.93
TOPBP1-206ENST00000508524 OBSL1O75147 1896 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 LRCOL1A6NCL2 159 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 CHMP2AO43633 222 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 PNPP00491 289 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 GCFC2P16383 781 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 HMGA1P17096 107 aaKnown RBP2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 AKT2P31751 481 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 TNFSF9P41273 254 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 KDSRQ06136 332 aa2.97□□□□□ -1.93
TOPBP1-206ENST00000508524 ST3GAL3Q11203 375 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms