RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 CNPY4Q8N129 248 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 UBE2J2Q8N2K1 259 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ZADH2Q8N4Q0 377 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 VN1R2Q8NFZ6 395 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 OR9K2Q8NGE7 335 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 AKR7LQ8NHP1 331 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ACER1Q8TDN7 264 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 RNF139Q8WU17 664 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 N4BP2L2Q92802 583 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 RNF185Q96GF1 192 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 OR8B4Q96RC9 309 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 MYCBPQ99417 103 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 ROGDIQ9GZN7 287 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 GBA3Q9H227 469 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ASB8Q9H765 288 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 IL26Q9NPH9 171 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 ZNF331Q9NQX6 463 aaPredicted RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 RABL2BQ9UNT1 228 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 TRAPPC4Q9Y296 219 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 CSDC2Q9Y534 153 aaKnown RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 SLC25A15Q9Y619 301 aa2.25□□□□□ -2.05
LSM6-205ENST00000507449 TDRD6O60522 2096 aaKnown RBP2.25□□□□□ -2.05
LSM6-205ENST00000507449 PHF3Q92576 2039 aaKnown RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 ATRXP46100 2492 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 IGKV1D-13A0A0B4J2D9 117 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 TRIM64CA6NLI5 447 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 ZNF716A6NP11 495 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 C12orf71A8MTZ7 269 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 KLF8O95600 359 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 GIPP09681 153 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 ZNF735P0CB33 412 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 IGKV1-13P0DP09 117 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 NR2C1P13056 603 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 CRISP2P16562 243 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 CRYBB2P43320 205 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 SULT1E1P49888 294 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 LHX2P50458 406 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 FGF8P55075 233 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 SH3BGRP55822 239 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 ENPEPQ07075 957 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 FZD2Q14332 565 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 PSG5Q15238 335 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 LCN12Q6JVE5 192 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 KDM7AQ6ZMT4 941 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 C19orf35Q6ZS72 473 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 ZNF621Q6ZSS3 439 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 UTS2BQ765I0 119 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 FAM228AQ86W67 206 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 PLA2G4DQ86XP0 818 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 PUSL1Q8N0Z8 303 aaKnown RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 ZNF557Q8N988 423 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 CYYR1Q96J86 154 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 CNDP1Q96KN2 507 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 SORT1Q99523 831 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 RIOK1Q9BRS2 568 aaKnown RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 RANBP3Q9H6Z4 567 aaPredicted RBP2.24□□□□□ -2.05
LSM6-205ENST00000507449 UGT1A7Q9HAW7 530 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 UGT1A10Q9HAW8 530 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 UGT1A8Q9HAW9 530 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 SPATA7Q9P0W8 599 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 CACNG2Q9Y698 323 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 IKBKGQ9Y6K9 419 aa2.24□□□□□ -2.05
LSM6-205ENST00000507449 FANCIQ9NVI1 1328 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 H0Y8G0 127 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 CCL21O00585 134 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 NDUFB10O96000 172 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ALDOBP05062 364 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 CRYGBP07316 175 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 PSG2P11465 335 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 MGMTP16455 207 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ZNF43P17038 809 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 AZU1P20160 251 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 CASP14P31944 242 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ATP5C1P36542 298 aaKnown RBP2.23□□□□□ -2.05
LSM6-205ENST00000507449 FBXW4P57775 412 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ERVK-25P63136 954 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 HMGN5P82970 282 aaKnown RBP2.23□□□□□ -2.05
LSM6-205ENST00000507449 LRRC74AQ0VAA2 488 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 CCDC183Q5T5S1 534 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 Q6ZSR3 168 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 MKXQ8IYA7 352 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 NECAB1Q8N987 351 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 OR4F15Q8NGB8 312 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 PLPPR1Q8TBJ4 325 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 TMEM158Q8WZ71 300 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 IL22RA2Q969J5 263 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ZNF799Q96GE5 643 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 TCHPQ9BT92 498 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 TMEM59Q9BXS4 323 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 MFFQ9GZY8 342 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 INPP5EQ9NRR6 644 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 ETNK2Q9NVF9 386 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 KLHL28Q9NXS3 571 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 CTNNA3Q9UI47 895 aa2.23□□□□□ -2.05
LSM6-205ENST00000507449 F11RQ9Y624 299 aaKnown RBP2.23□□□□□ -2.05
LSM6-205ENST00000507449 IGHV3-64DA0A0J9YX35 117 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 A0A1B0GUA9 196 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 A6NDX4 124 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 ZNF726A6NNF4 738 aa2.22□□□□□ -2.05
LSM6-205ENST00000507449 FAM166BA8MTA8 275 aa2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms