RNA–Protein interactions for RNA: ENST00000507293.1

HMGCS1-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 1 (best)

Gene HMGCS1, Length 708 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-204ENST00000507293 BLOC1S3Q6QNY0 202 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 NET1Q7Z628 596 aaPredicted RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ZCCHC24Q8N2G6 241 aaKnown RBP9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 ADPRHL1Q8NDY3 354 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC47A1Q96FL8 570 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 C7orf26Q96N11 449 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 DOK1Q99704 481 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 EBF4Q9BQW3 602 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 EMC6Q9BV81 110 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 SPATA5L1Q9BVQ7 753 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 IKZF5Q9H5V7 419 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 DYNLRB1Q9NP97 96 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 CCDC167Q9P0B6 97 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 VAPAQ9P0L0 249 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 USP22Q9UPT9 525 aa9.99□□□□□ -0.81
HMGCS1-204ENST00000507293 A0A087WUJ7 227 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 TRBV5-3A0A0A0MS03 114 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 A0A0B4J2E0 115 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 A0A1B0GX12 115 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 TMEM129A0AVI4 362 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SH3PXD2BA1X283 911 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 LRP5LA4QPB2 252 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 VSTM5A8MXK1 200 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 TGFAP01135 160 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 HLA-HP01893 362 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 BGLAPP02818 100 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 ERCC1P07992 297 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 DAOP14920 347 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 AQP1P29972 269 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SRSF2Q01130 221 aaKnown RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 POU3F1Q03052 451 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 DAG1Q14118 895 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 MFSD13AQ14CX5 517 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 OR1Q1Q15612 314 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 KRT80Q6KB66 452 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 WDFY1Q8IWB7 410 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 CCDC36Q8IYA8 594 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 C20orf196Q8IYI0 205 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 CDK20Q8IZL9 346 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SCAIQ8N9R8 606 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 OR6S1Q8NH40 331 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 CKAP2Q8WWK9 683 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 NEU4Q8WWR8 484 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC41A3Q96GZ6 507 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 ANKRD27Q96NW4 1050 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 EPYCQ99645 322 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SOX7Q9BT81 388 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 CCDC28BQ9BUN5 200 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 ASPNQ9BXN1 380 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 TMEM27Q9HBJ8 222 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 NOX3Q9HBY0 568 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SLCO1B3Q9NPD5 702 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC52A3Q9NQ40 469 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 MED29Q9NX70 200 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SELENONQ9NZV5 590 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 FBXO9Q9UK97 447 aaPredicted RBP9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC13A4Q9UKG4 626 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 CORINQ9Y5Q5 1042 aa9.98□□□□□ -0.81
HMGCS1-204ENST00000507293 STAB1Q9NY15 2570 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 CUBNO60494 3623 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 PRORSD1PA6NEY8 169 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 LRRN3E7EW58 273 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 TPST2O60704 377 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ERLIN1O75477 346 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 TGDSO95455 350 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 IGFBP1P08833 259 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 CD79AP11912 226 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 GPX2P18283 190 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 HNF1AP20823 631 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 SLC6A2P23975 617 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 GIFP27352 417 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 THBS2P35442 1172 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 PMS2P3Q13401 168 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ADRM1Q16186 407 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 GSG1Q2KHT4 349 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 AGKQ53H12 422 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 BEND6Q5SZJ8 279 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF813Q6ZN06 617 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 C10orf53Q8N6V4 93 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF540Q8NDQ6 660 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 IL17RDQ8NFM7 739 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 LRRC8CQ8TDW0 803 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 MS4A3Q96HJ5 214 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 TXNDC15Q96J42 360 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 MOGAT1Q96PD6 335 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ZNF607Q96SK3 696 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 WFDC6Q9BQY6 131 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 CPPED1Q9BRF8 314 aaPredicted RBP9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ULBP2Q9BZM5 246 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 TMEM38AQ9H6F2 299 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 B3GAT2Q9NPZ5 323 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 CORO2BQ9UQ03 480 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 ANGPT4Q9Y264 503 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 POFUT2Q9Y2G5 429 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 GMEB1Q9Y692 573 aa9.97□□□□□ -0.81
HMGCS1-204ENST00000507293 EVPLLA8MZ36 301 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 M0R3H8 397 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 SERPINB7O75635 380 aa9.96□□□□□ -0.82
HMGCS1-204ENST00000507293 SERPINI2O75830 405 aa9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms