RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 SLC35D2Q76EJ3 337 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 AAED1Q7RTV5 226 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 WDFY1Q8IWB7 410 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 TXNDC15Q96J42 360 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 FEVQ99581 238 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 PKP2Q99959 881 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 ENKD1Q9H0I2 346 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 OPN3Q9H1Y3 402 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-210ENST00000506767 KCNJ16Q9NPI9 418 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 INIPQ9NRY2 104 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 MED29Q9NX70 200 aa11.37□□□□□ -0.59
TCOF1-210ENST00000506767 MAGED1Q9Y5V3 778 aaPredicted RBP11.37□□□□□ -0.59
TCOF1-210ENST00000506767 DIDO1Q9BTC0 2240 aaKnown RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 SLC35F4A4IF30 521 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 FAM90A27PA6NNH2 459 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 MCIDASD6RGH6 385 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 SMNDC1O75940 238 aaKnown RBP eCLIP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 NDUFB2O95178 105 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 CNOT4O95628 575 aaKnown RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 ADAP00813 363 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 IGHMP01871 453 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 TP53P04637 393 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 ANXA8P13928 327 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 POU2F1P14859 743 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 IFNGR1P15260 489 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 GSTM3P21266 225 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 PRKACGP22612 351 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 SELENOPP49908 381 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 COX10Q12887 443 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 TAF11Q15544 211 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 RFX4Q33E94 735 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 NIPAL3Q6P499 406 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 SMARCD3Q6STE5 483 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 THSD4Q6ZMP0 1018 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 RASSF6Q6ZTQ3 369 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 BEND4Q6ZU67 534 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 LUZP2Q86TE4 346 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 HIPK1Q86Z02 1210 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF100Q8IYN0 542 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 TMEM123Q8N131 208 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 CLDN22Q8N7P3 220 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 OR6X1Q8NH79 312 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 APH1AQ96BI3 265 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 ADAD1Q96M93 576 aaKnown RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 OR2M2Q96R28 347 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 GPX7Q96SL4 187 aaPredicted RBP11.36□□□□□ -0.59
TCOF1-210ENST00000506767 NIPSNAP1Q9BPW8 284 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 SEMA6AQ9H2E6 1030 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 TXNIPQ9H3M7 391 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 NRIP3Q9NQ35 241 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 IL20Q9NYY1 176 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 PRSS50Q9UI38 385 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 HCFC1P51610 2035 aa11.36□□□□□ -0.59
TCOF1-210ENST00000506767 PCNX1Q96RV3 2341 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 A0A1W2PRG6 482 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 OR6C65A6NJZ3 312 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 EEF1E1-BLOC1S5C9J1V9 151 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 G3V2T6 193 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 EEF1E1O43324 174 aaKnown RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 AKAP8O43823 692 aaKnown RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 BCL10O95999 233 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 BIDP55957 195 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 CTXN1P60606 82 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ELF3P78545 371 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ACKR1Q16570 336 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ARMC4Q5T2S8 1044 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 TSPO2Q5TGU0 170 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 FBXW9Q5XUX1 488 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ANKRD34AQ69YU3 496 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 FAHD1Q6P587 224 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 CASP12Q6UXS9 341 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ZNF620Q6ZNG0 422 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 Q6ZT83 130 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 FAM122BQ7Z309 247 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 STK32CQ86UX6 486 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 KIF18BQ86Y91 864 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 GABRG1Q8N1C3 465 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 SVOPLQ8N434 492 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ASB10Q8WXI3 467 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 STMN2Q93045 179 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 GTPBP3Q969Y2 492 aaKnown RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 LRR1Q96L50 414 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 EMC6Q9BV81 110 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 LINC00470Q9BZP3 86 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 GABARAPL1Q9H0R8 117 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 OR52D1Q9H346 318 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 SLC7A10Q9NS82 523 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 ELOVL5Q9NYP7 299 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 REV1Q9UBZ9 1251 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 MALT1Q9UDY8 824 aa11.35□□□□□ -0.59
TCOF1-210ENST00000506767 FOXD3Q9UJU5 478 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 KLF2Q9Y5W3 355 aaPredicted RBP11.35□□□□□ -0.59
TCOF1-210ENST00000506767 PTPN13Q12923 2485 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 NAV2Q8IVL1 2488 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 PDLIM1O00151 329 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 RRP9O43818 475 aaKnown RBP11.34□□□□□ -0.59
TCOF1-210ENST00000506767 SERPINI2O75830 405 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 CLDN1O95832 211 aa11.34□□□□□ -0.59
TCOF1-210ENST00000506767 CD14P08571 375 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms