RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 LMNTD1Q8N9Z9 388 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 STEAP2Q8NFT2 490 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PFN4Q8NHR9 129 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 TFGQ92734 400 aaPredicted RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 INTS12Q96CB8 462 aaKnown RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PRAP1Q96NZ9 151 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 TEX101Q9BY14 249 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CCDC86Q9H6F5 360 aaKnown RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 IL21Q9HBE4 155 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 MMP26Q9NRE1 261 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 GSN-AS1Q9NRJ2 163 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 IL36AQ9UHA7 158 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 TINAGQ9UJW2 476 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CDV3Q9UKY7 258 aaKnown RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 A0A1W2PR48 441 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 FEZF1A0PJY2 475 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 SLC25A12O75746 678 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ZIC2O95409 532 aaPredicted RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PPP1R3DO95685 299 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CKMP06732 381 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CLUP10909 449 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CD79AP11912 226 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ADCYAP1P18509 176 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PDZK1IP1Q13113 114 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PNLIPRP3Q17RR3 467 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ISXQ2M1V0 245 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 CMTM8Q8IZV2 173 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF619Q8N2I2 560 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 GTPBP8Q8N3Z3 284 aaPredicted RBP14.54□□□□□ -0.08
SCLT1-208ENST00000506368 AMER3Q8N944 861 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 C7orf57Q8NEG2 295 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 OR51S1Q8NGJ8 323 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 OR5AR1Q8NGP9 310 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF417Q8TAU3 575 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF559Q9BR84 538 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 EGLN1Q9GZT9 426 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 SLC25A18Q9H1K4 315 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 STEAP1Q9UHE8 339 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 PLEKHA6Q9Y2H5 1048 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 DENND4CQ5VZ89 1909 aa14.54□□□□□ -0.08
SCLT1-208ENST00000506368 A0A1W2PPC1 479 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 P2RX6O15547 441 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 AIFM1O95831 613 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TPT1P13693 172 aaKnown RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 PRSS3P35030 304 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DLSTP36957 453 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 VASPP50552 380 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ARHGDIBP52566 201 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 SSTP61278 116 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 STEAP1BQ6NZ63 245 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DRAM2Q6UX65 266 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DBX2Q6ZNG2 339 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 PARGQ86W56 976 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 CBLN2Q8IUK8 224 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 C15orf54Q8N8G6 183 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM229BQ8NBD8 167 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 INO80EQ8NBZ0 244 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 CLEC1AQ8NC01 280 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 NANPQ8TBE9 248 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 CDS1Q92903 461 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF681Q96N22 645 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 CMSS1Q9BQ75 279 aaKnown RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 SFXN1Q9H9B4 322 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM27Q9HBJ8 222 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ASF1BQ9NVP2 202 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DTX4Q9Y2E6 619 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 PRKAB1Q9Y478 270 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TRBV5-5A0A0J9YX44 114 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 MAGEB4O15481 346 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 SRPX2O60687 465 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF806P0C7X5 589 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 NID1P14543 1247 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 KCNJ3P48549 501 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DPTQ07507 201 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ABHD17CQ6PCB6 329 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TMEM205Q6UW68 189 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 WDR88Q6ZMY6 472 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 TCEAL8Q8IYN2 117 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ACOT4Q8N9L9 421 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 OR9A2Q8NGT5 310 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 SLC22A8Q8TCC7 542 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 RXFP4Q8TDU9 374 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 DUSP19Q8WTR2 217 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ZMYND19Q96E35 227 aaPredicted RBP14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF350Q9GZX5 532 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 POFUT1Q9H488 388 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 ZNF576Q9H609 170 aa14.53□□□□□ -0.08
SCLT1-208ENST00000506368 MDC1Q14676 2089 aaKnown RBP14.52□□□□□ -0.08
SCLT1-208ENST00000506368 TRAV20A0A0B4J274 112 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 MEX3AA1L020 520 aaKnown RBP14.52□□□□□ -0.09
SCLT1-208ENST00000506368 C5orf52A6NGY3 159 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 OR2AT4A6NND4 320 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 TTLL8A6PVC2 850 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 HSPB2A8KAH6 182 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 F8VVB4 439 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 F8VWA3 439 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 AK1P00568 194 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 DDX6P26196 483 aaKnown RBP eCLIP14.52□□□□□ -0.09
SCLT1-208ENST00000506368 GPR1P46091 355 aa14.52□□□□□ -0.09
SCLT1-208ENST00000506368 CLDN12P56749 244 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms