RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 LIPNQ5VXI9 398 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ZNF660Q6AZW8 331 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 TANGO2Q6ICL3 276 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ULK3Q6PHR2 472 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 DPY19L2P2Q6ZN68 376 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 OR8K3Q8NH51 312 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 HOXB13Q92826 284 aaPredicted RBP10.84□□□□□ -0.67
UBE3D-206ENST00000505226 ALG12Q9BV10 488 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 FXYD6Q9H0Q3 95 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 CD93Q9NPY3 652 aa10.84□□□□□ -0.67
UBE3D-206ENST00000505226 OR2W5A6NFC9 320 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 MAS1P04201 325 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 RAB40ALP0C0E4 278 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 CALCBP10092 127 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 C5AR1P21730 350 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 PGDP52209 483 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 ODF4Q2M2E3 257 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 PCGF3Q3KNV8 242 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 C1orf53Q5VUE5 145 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 OTPQ5XKR4 325 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 ZCCHC12Q6PEW1 402 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 RTL10Q7L3V2 364 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 TMPRSS12Q86WS5 348 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 BVESQ8NE79 360 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 SCARB1Q8WTV0 552 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 RAB40AQ8WXH6 277 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 TSACCQ96A04 125 aaPredicted RBP10.83□□□□□ -0.67
UBE3D-206ENST00000505226 ZNF524Q96C55 264 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 ZNF578Q96N58 590 aaPredicted RBP10.83□□□□□ -0.67
UBE3D-206ENST00000505226 ULBP3Q9BZM4 244 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 LYRM4Q9HD34 91 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 FBXL21Q9UKT6 434 aa10.83□□□□□ -0.67
UBE3D-206ENST00000505226 TGFBR3LH3BV60 316 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 TOR1AO14656 332 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 DEFB115Q30KQ5 88 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 FAM122CQ6P4D5 195 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 LEG1Q6P5S2 330 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 CA13Q8N1Q1 262 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 OR4C3Q8NH37 302 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 OR2M4Q96R27 311 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 GPN1Q9HCN4 374 aaPredicted RBP10.83□□□□□ -0.68
UBE3D-206ENST00000505226 TCF7L1Q9HCS4 588 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 RWDD3Q9Y3V2 267 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 IGKV1D-42A0A075B6H8 117 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 OR6C74A6NCV1 312 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 GOSR2O14653 212 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 TSPAN9O75954 239 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 GLCEO94923 617 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 ABHD16AO95870 558 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 FCARP24071 287 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 LTBQ06643 244 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 HYAL4Q2M3T9 481 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 Q499Y3 187 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 B3GNTL1Q67FW5 361 aaPredicted RBP10.83□□□□□ -0.68
UBE3D-206ENST00000505226 NPSR1Q6W5P4 371 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 ABHD13Q7L211 337 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 SPACA7Q96KW9 195 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 AIFM2Q9BRQ8 373 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 LRIT1Q9P2V4 623 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 RABL2AQ9UBK7 228 aaPredicted RBP10.83□□□□□ -0.68
UBE3D-206ENST00000505226 RABL2BQ9UNT1 228 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 HEBP2Q9Y5Z4 205 aa10.83□□□□□ -0.68
UBE3D-206ENST00000505226 C2orf16Q68DN1 1984 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 A0A087WUJ7 227 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 HMSDA8MTL9 139 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 H7C417 338 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ARPC3O15145 178 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RP2O75695 350 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 KDM4BO94953 1096 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 GPANK1O95872 356 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 AK1P00568 194 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RLN1P04808 185 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 MST1P26927 711 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 AQP2P41181 271 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 SEC13P55735 322 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 DLX5P56178 289 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RPS4XP62701 263 aaKnown RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 LGALS3BPQ08380 585 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 DMWDQ09019 674 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 EXD3Q8N9H8 876 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RELL2Q8NC24 303 aaPredicted RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RCBTB1Q8NDN9 531 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 OR2AK2Q8NG84 335 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 OR5AK2Q8NH90 309 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 PATE1Q8WXA2 126 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 DVL3Q92997 716 aaPredicted RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 LRFN5Q96NI6 719 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 PLA2G2FQ9BZM2 168 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RXFP3Q9NSD7 469 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 MTFP1Q9UDX5 166 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 TRBV5-5A0A0J9YX44 114 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 TVP23AA6NH52 213 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 BLOC1S5-TXNDC5H3BN57 136 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 H7C1C5 153 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 RLN2P04090 185 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 MNDAP41218 407 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 PPP1CAP62136 330 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 LCN6P62502 163 aa10.82□□□□□ -0.68
UBE3D-206ENST00000505226 ALKBH1Q13686 389 aaKnown RBP10.82□□□□□ -0.68
UBE3D-206ENST00000505226 SLC35D3Q5M8T2 416 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms