RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, human

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LMNB1-208	ENST00000504788	CLEC4A	Q9UMR7	237 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ADAM18	Q9Y3Q7	739 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	FAM32A	Q9Y421	112 aa	Known RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	TACC2	O95359	2948 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LRBA	P50851	2863 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788		A8MXE2	369 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RPL36A-HNRNPH2	H7BZ11	118 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	CCL21	O00585	134 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR10H3	O60404	316 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZG16	O60844	167 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	MITF	O75030	526 aa	Predicted RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	CCNB2	O95067	398 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	F13B	P05160	661 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	CRH	P06850	196 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PGA4	P0DJD7	388 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PGA3	P0DJD8	388 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	FCGR1A	P12314	374 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	FCGR2A	P12318	317 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	APEH	P13798	732 aa	Known RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	POU2F1	P14859	743 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	COX5A	P20674	150 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	AGA	P20933	346 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PEX2	P28328	305 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR3A2	P47893	321 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PCYT1A	P49585	367 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	SELENOP	P49908	381 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR2B6	P58173	313 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	SMIM11A	P58511	58 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	CDK5	Q00535	292 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LGALS3BP	Q08380	585 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RASGEF1B	Q0VAM2	473 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RNPS1	Q15287	305 aa	Known RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RCN1	Q15293	331 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ACKR1	Q16570	336 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RFX4	Q33E94	735 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZBED5	Q49AG3	693 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OGFRL1	Q5TC84	451 aa	Predicted RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PPP4R4	Q6NUP7	873 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LRFN4	Q6PJG9	635 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PTCHD4	Q6ZW05	846 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNF627	Q7L945	461 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OAF	Q86UD1	273 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LNX2	Q8N448	690 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LINC00471	Q8N535	108 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR51A7	Q8NH64	312 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	LILRB4	Q8NHJ6	448 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	PIGX	Q8TBF5	258 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZNRF4	Q8WWF5	429 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	ASB10	Q8WXI3	467 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OXGR1	Q96P68	337 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	TSPAN32	Q96QS1	320 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	OR2M2	Q96R28	347 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	TM9SF2	Q99805	663 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	CIB1	Q99828	191 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	BDH2	Q9BUT1	245 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	GABARAPL3	Q9BY60	117 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	EGLN3	Q9H6Z9	239 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	EXO5	Q9H790	373 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	DCLRE1B	Q9H816	532 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	YY1AP1	Q9H869	796 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	SMURF2	Q9HAU4	748 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	GLRX2	Q9NS18	164 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	C6orf203	Q9P0P8	240 aa	Predicted RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	IL20RA	Q9UHF4	553 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	SH3BGRL2	Q9UJC5	107 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	MGAT4B	Q9UQ53	548 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RCE1	Q9Y256	329 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RASD1	Q9Y272	281 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	TMEM5	Q9Y2B1	443 aa		4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RRP15	Q9Y3B9	282 aa	Known RBP	4.37	□□□□□ -1.71
LMNB1-208	ENST00000504788	RAI1	Q7Z5J4	1906 aa	Predicted RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CENPE	Q02224	2701 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CAD	P27708	2225 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	TRGV8	A0A0C4DH27	118 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788		A0A1B0GUH1	482 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC35F4	A4IF30	521 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ZAR1L	A6NP61	321 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	EFCAB9	A8MZ26	197 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788		G3V2T6	193 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	BLOC1S5-TXNDC5	H3BN57	136 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	DCTN6	O00399	190 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	EI24	O14681	340 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ST8SIA5	O15466	376 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	UPK3A	O75631	287 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CD14	P08571	375 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ITGA5	P08648	1049 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ADORA3	P0DMS8	318 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	OSM	P13725	252 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ANXA8	P13928	327 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	IFNGR1	P15260	489 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	CTSS	P25774	331 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	GRN	P28799	593 aa	Known RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	GCK	P35557	465 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	POU3F1	Q03052	451 aa	Predicted RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	RBPJ	Q06330	500 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	COX10	Q12887	443 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	FOXD4	Q12950	439 aa	Predicted RBP	4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	SLC36A3	Q495N2	470 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	ALG10	Q5BKT4	473 aa		4.36	□□□□□ -1.71
LMNB1-208	ENST00000504788	PDSS1	Q5T2R2	415 aa		4.36	□□□□□ -1.71

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