RNA–Protein interactions for RNA: ENST00000498077.6

XRN1-214, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 5,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-214ENST00000498077 TRA2BP62995 288 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 PFKPQ01813 784 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 DHRS2Q13268 280 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CTBP1Q13363 440 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TUSC3Q13454 348 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 IL18R1Q13478 541 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF789Q5FWF6 425 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 NSUN5P2Q63ZY6 315 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 KLC3Q6P597 504 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 Q6Q795 121 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ZNF788Q6ZQV5 615 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 LRRC8DQ7L1W4 858 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SHFQ7M4L6 423 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC16A9Q7RTY1 509 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MDGA2Q7Z553 956 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 NOP9Q86U38 636 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 THNSL2Q86YJ6 484 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SDR16C5Q8N3Y7 309 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TMEM217Q8N7C4 229 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ADAD2Q8NCV1 583 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC26A10Q8NG04 563 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR4F15Q8NGB8 312 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 OR4D5Q8NGN0 318 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MRGPRDQ8TDS7 321 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TNFAIP8L1Q8WVP5 186 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CPNE4Q96A23 557 aaPredicted RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 FAM131CQ96AQ9 280 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FAM3DQ96BQ1 224 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 FAF2Q96CS3 445 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC25A38Q96DW6 304 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CNDP2Q96KP4 475 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 CAMK1GQ96NX5 476 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 TBL1YQ9BQ87 522 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 CPEB1Q9BZB8 566 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 ELOVL4Q9GZR5 314 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 RMND5AQ9H871 391 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 MBNL1Q9NR56 388 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP1.27□□□□□ -2.21
XRN1-214ENST00000498077 TMLHEQ9NVH6 421 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 DNAJC27Q9NZQ0 273 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 SLC23A1Q9UHI7 598 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 WASHC3Q9Y3C0 194 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 RHBDD3Q9Y3P4 386 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 ABCC12Q96J65 1359 aa1.27□□□□□ -2.21
XRN1-214ENST00000498077 USP42Q9H9J4 1324 aaKnown RBP1.27□□□□□ -2.21
XRN1-214ENST00000498077 IGLV7-46A0A075B6I9 117 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 A0A1W2PQ72 361 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GSTTP1A0A1W2PQM5 241 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GRIFINA4D1Z8 144 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CASTOR2A6NHX0 329 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 VSTM2BA6NLU5 285 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FAM47E-STBD1D6RA91 191 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 H3BMM5 538 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PSMD12O00232 456 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ACKR2O00590 384 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WNT10BO00744 389 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TNFRSF10CO14798 259 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NCR3O14931 201 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DEGS1O15121 323 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 SEC14L2O76054 403 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 B3GAT3O94766 335 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ABCB1P08183 1280 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 KCNA2P16389 499 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GAP43P17677 238 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 AHCYP23526 432 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF93P35789 620 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 NUMBP49757 651 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 NPRL3Q12980 569 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 EIF4EBP2Q13542 120 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 ZNF267Q14586 743 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 LAGE3Q14657 143 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD1Q15327 319 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 CD226Q15762 336 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 HADHQ16836 314 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 SYT14P1Q58G82 188 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 C10orf76Q5T2E6 689 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DCAF12L1Q5VU92 463 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FBXW9Q5XUX1 488 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 FCRL6Q6DN72 434 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 WASH2PQ6VEQ5 465 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 RNF165Q6ZSG1 346 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KCTD9Q7L273 389 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GPR149Q86SP6 731 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 GPD1LQ8N335 351 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM252Q8N6L7 170 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ARFGAP1Q8N6T3 406 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ARL14EPQ8N8R7 260 aaPredicted RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 GATD1Q8NB37 220 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 ANKRD20A12PQ8NF67 263 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 KIR2DL5BQ8NHK3 375 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DCAF4Q8WV16 495 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DNAAF4Q8WXU2 420 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 TESCQ96BS2 214 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 OR10C1Q96KK4 312 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DEPDC7Q96QD5 511 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PCDHB18PQ96TA0 734 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 UTP23Q9BRU9 249 aaKnown RBP1.26□□□□□ -2.21
XRN1-214ENST00000498077 TMEM204Q9BSN7 226 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 DESI2Q9BSY9 194 aa1.26□□□□□ -2.21
XRN1-214ENST00000498077 PDCD10Q9BUL8 212 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms