RNA–Protein interactions for RNA: ENST00000497960.5

NUP50-219, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 986 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-219ENST00000497960 SEMG1P04279 462 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 ZNF43P17038 809 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 ITGA2P17301 1181 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 ERFP50548 548 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 FOXG1P55316 489 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 RIPPLY3P57055 190 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 VLDLRP98155 873 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 PIN1Q13526 163 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 C1DQ13901 141 aaKnown RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 MFSD13AQ14CX5 517 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 GABRA6Q16445 453 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 ZNF672Q499Z4 452 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 FAM98BQ52LJ0 330 aaKnown RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 KLHL24Q6TFL4 600 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 PRSS57Q6UWY2 283 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 TMEM108Q6UXF1 575 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 TSPYL5Q86VY4 417 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 ZDHHC21Q8IVQ6 265 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 AQP12AQ8IXF9 295 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 KBTBD8Q8NFY9 601 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 TAAR8Q969N4 342 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 RADILQ96JH8 1075 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 OXGR1Q96P68 337 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 RAB3IPQ96QF0 476 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 FNDC11Q9BVV2 318 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 GSX2Q9BZM3 304 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 MGAT4BQ9UQ53 548 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 AURKCQ9UQB9 309 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 LAMP3Q9UQV4 416 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 B3GALT5Q9Y2C3 310 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 SLC25A15Q9Y619 301 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 ENPP4Q9Y6X5 453 aa13.47□□□□□ -0.25
NUP50-219ENST00000497960 RAI1Q7Z5J4 1906 aaPredicted RBP13.47□□□□□ -0.25
NUP50-219ENST00000497960 FLNAP21333 2647 aaKnown RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 PLCE1Q9P212 2302 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 IGKV1D-42A0A075B6H8 117 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 A0A1W2PR80 420 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 DHRS12A0PJE2 317 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 ZNF587BE7ETH6 402 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 M0R082 166 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 ABCD4O14678 606 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 PTAFRP25105 342 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 GRPRP30550 384 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 PTH2RP49190 550 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 SELENOPP49908 381 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 ZNF83P51522 516 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 RPS4XP62701 263 aaKnown RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 IL1RL1Q01638 556 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 CHRNB3Q05901 458 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 ST3GAL3Q11203 375 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 C1QTNF12Q5T7M4 302 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 NIPAL3Q6P499 406 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 H1FNTQ75WM6 255 aaPredicted RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 KRTAP1-3Q8IUG1 177 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 EPHX4Q8IUS5 362 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 OFCC1Q8IZS5 231 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 KDM8Q8N371 416 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 OR6S1Q8NH40 331 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 LILRB1Q8NHL6 650 aaPredicted RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 ZNF417Q8TAU3 575 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 SMAP2Q8WU79 429 aaPredicted RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 NEUROG1Q92886 237 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 UTP4Q969X6 686 aaKnown RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 ZNF587Q96SQ5 575 aaPredicted RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 MAGIXQ9H6Y5 334 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 DLL4Q9NR61 685 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 SLC17A5Q9NRA2 495 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 NPAP1Q9NZP6 1156 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 RHCGQ9UBD6 479 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 A4GNTQ9UNA3 340 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 AMDHD2Q9Y303 409 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 CORINQ9Y5Q5 1042 aa13.46□□□□□ -0.25
NUP50-219ENST00000497960 MAGED1Q9Y5V3 778 aaPredicted RBP13.46□□□□□ -0.25
NUP50-219ENST00000497960 ERICH4A6NGS2 130 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 M0R1B8 84 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 KPNA4O00629 521 aaPredicted RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 AKAP8O43823 692 aaKnown RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 FZD7O75084 574 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 DIRAS1O95057 198 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 THY1P04216 161 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 THRBP10828 461 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 NQO1P15559 274 aaKnown RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 RHCEP18577 417 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 CDH2P19022 906 aaPredicted RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 CBLP22681 906 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 CDH11P55287 796 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 CLDN17P56750 224 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 PRPS1P60891 318 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 SPIBQ01892 262 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 FGD3Q5JSP0 725 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 TTC33Q6PID6 262 aaPredicted RBP13.45□□□□□ -0.26
NUP50-219ENST00000497960 DEPDC4Q8N2C3 294 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 C10orf53Q8N6V4 93 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 WDR31Q8NA23 367 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 IGFBPL1Q8WX77 278 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 MPP4Q96JB8 637 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 C7orf34Q96L11 122 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 TMEM43Q9BTV4 400 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 ASPNQ9BXN1 380 aa13.45□□□□□ -0.26
NUP50-219ENST00000497960 ZNF701Q9NV72 531 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms