RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 ANGPTL1O95841 491 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CSTAP01040 98 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SERPINA7P05543 415 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 LYNP07948 512 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RPSAP08865 295 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 UBTFL6P0CB48 400 aaPredicted RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 UBL4AP11441 157 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MST1P26927 711 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RYKP34925 604 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 KRT20P35900 424 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 DLSTP36957 453 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 GSSP48637 474 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 NOVA1P51513 510 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RPS6KA3P51812 740 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 FBXW4P57775 412 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MLF1P58340 268 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SUMO2P61956 95 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RPS15P62841 145 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RPP38P78345 283 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MYBPC1Q00872 1141 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF117Q03924 483 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 COX10Q12887 443 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 NPRL3Q12980 569 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 IL18R1Q13478 541 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 KEAP1Q14145 624 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 EFR3AQ14156 821 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 NTRK2Q16620 822 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CTU2Q2VPK5 515 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 BTBD16Q32M84 506 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 FGD3Q5JSP0 725 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF691Q5VV52 312 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TTC23Q5W5X9 447 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 KRTAP5-11Q6L8G4 156 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM81Q6P7N7 255 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 KLHL17Q6TDP4 642 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 PLEKHM3Q6ZWE6 761 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MBOAT2Q6ZWT7 520 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 GALNT5Q7Z7M9 940 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MARCH3Q86UD3 253 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 APLFQ8IW19 511 aaPredicted RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RNF113BQ8IZP6 322 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TAGAPQ8N103 731 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 GALNT15Q8N3T1 639 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF527Q8NB42 609 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 AQP11Q8NBQ7 271 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM255BQ8WV15 326 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CYGBQ8WWM9 190 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 PSMF1Q92530 271 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SLC38A4Q969I6 547 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ARSGQ96EG1 525 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 WDYHV1Q96HA8 205 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CNBD2Q96M20 576 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 MUS81Q96NY9 551 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 RASL10BQ96S79 203 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CCNL2Q96S94 520 aaPredicted RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 DEFB126Q9BYW3 111 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 UCK2Q9BZX2 261 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TRIM2Q9C040 744 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CACYBPQ9HB71 228 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 TMEM27Q9HBJ8 222 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZBTB20Q9HC78 741 aaPredicted RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 ZNF160Q9HCG1 818 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CTPS2Q9NRF8 586 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 PAPOLBQ9NRJ5 636 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 KRT84Q9NSB2 600 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 P4HTMQ9NXG6 502 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 GAR1Q9NY12 217 aaKnown RBP4.82□□□□□ -1.64
GGPS1-208ENST00000497327 IL17BQ9UHF5 180 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 FBXL4Q9UKA2 621 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SLC7A7Q9UM01 511 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 POFUT2Q9Y2G5 429 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 HSPE1-MOB4S4R3N1 261 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 SDK2Q58EX2 2172 aa4.82□□□□□ -1.64
GGPS1-208ENST00000497327 CCDC88CQ9P219 2028 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 IGKV1D-42A0A075B6H8 117 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 A0A087WUJ7 227 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 MAGEA13PA6NCF6 341 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 TRIM64CA6NLI5 447 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 H3BNH8 94 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 CHP2O43745 196 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 PIP5K1CO60331 668 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 OR10H3O60404 316 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 PTP4A3O75365 173 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 OR6B1O95007 311 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 IGF2P01344 180 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 IGFBP1P08833 259 aaPredicted RBP4.81□□□□□ -1.64
GGPS1-208ENST00000497327 SMIM18P0DKX4 95 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 ICAM2P13598 275 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 POU2F1P14859 743 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 GABRB1P18505 474 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 CDH2P19022 906 aaPredicted RBP4.81□□□□□ -1.64
GGPS1-208ENST00000497327 GSTM3P21266 225 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 CHMP24386 653 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 IL12BP29460 328 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 RBMS1P29558 406 aaKnown RBP4.81□□□□□ -1.64
GGPS1-208ENST00000497327 OTX2P32243 289 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 IFNA8P32881 189 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 EVI2BP34910 448 aa4.81□□□□□ -1.64
GGPS1-208ENST00000497327 GGT2P36268 569 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms