RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 ILKAPQ9H0C8 392 aaPredicted RBP2.78□□□□□ -1.96
SMC4-225ENST00000497203 MMP26Q9NRE1 261 aa2.78□□□□□ -1.96
SMC4-225ENST00000497203 PSMC3IPQ9P2W1 217 aaPredicted RBP2.78□□□□□ -1.96
SMC4-225ENST00000497203 NUFIP1Q9UHK0 495 aaKnown RBP2.78□□□□□ -1.96
SMC4-225ENST00000497203 NUP50Q9UKX7 468 aa2.78□□□□□ -1.96
SMC4-225ENST00000497203 SLC25A15Q9Y619 301 aa2.78□□□□□ -1.96
SMC4-225ENST00000497203 CDHR2Q9BYE9 1310 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 GJE1A6NN92 205 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CCL21O00585 134 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 FAM189A1O60320 539 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 NPIPB7O75200 414 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CST1P01037 141 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 IGHV2-5P01817 119 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 SERPIND1P05546 499 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CRYGBP07316 175 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 UBTFL1P0CB47 393 aaPredicted RBP2.77□□□□□ -1.97
SMC4-225ENST00000497203 CHTF8P0CG12 524 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 DUX4L4P0CJ87 422 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 ATP5C1P36542 298 aaKnown RBP2.77□□□□□ -1.97
SMC4-225ENST00000497203 UGT2B15P54855 530 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 FBXW4P57775 412 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 PSG7Q13046 419 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 PPIL2Q13356 520 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 GPNMBQ14956 572 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 PAGE3Q5JUK9 113 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 ARMC12Q5T9G4 340 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 C1orf94Q6P1W5 598 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 TRIM40Q6P9F5 258 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 C6orf89Q6UWU4 347 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CCDC73Q6ZRK6 1079 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 RFLNAQ6ZTI6 216 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 PEX26Q7Z412 305 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 PIANPQ8IYJ0 282 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 SUMF2Q8NBJ7 301 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 VN1R2Q8NFZ6 395 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 OR10G9Q8NGN4 311 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 OR2G2Q8NGZ5 317 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 RAB3IL1Q8TBN0 382 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 GPR151Q8TDV0 419 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 ARPC1AQ92747 370 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 ELSPBP1Q96BH3 223 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 RPUSD4Q96CM3 377 aaKnown RBP2.77□□□□□ -1.97
SMC4-225ENST00000497203 MS4A4EQ96PG1 132 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 MBOAT4Q96T53 435 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 RASL11BQ9BPW5 248 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CENPKQ9BS16 269 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 NUP58Q9BVL2 599 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 ADAP2Q9NPF8 381 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CALYQ9NYX4 217 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 CELA1Q9UNI1 258 aa2.77□□□□□ -1.97
SMC4-225ENST00000497203 A0A0G2JN53 185 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 H0Y9J4 135 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 DLGAP1O14490 977 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 SLC31A2O15432 143 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 C1orf105O95561 183 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 GIPP09681 153 aaPredicted RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 RORAP35398 523 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 TNNT2P45379 298 aaPredicted RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 TFPI2P48307 235 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 CSNK1DP48730 415 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 PDIA2Q13087 525 aaKnown RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 VPS26BQ4G0F5 336 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 LRRC10Q5BKY1 277 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 METAP1DQ6UB28 335 aaPredicted RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 RALGPS2Q86X27 583 aaPredicted RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 ZNF557Q8N988 423 aaPredicted RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 PIBF1Q8WXW3 757 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 NDRG1Q92597 394 aaKnown RBP2.76□□□□□ -1.97
SMC4-225ENST00000497203 NRTNQ99748 197 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 ECSITQ9BQ95 431 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 TMEM59Q9BXS4 323 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 HES7Q9BYE0 225 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 SRMSQ9H3Y6 488 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 ANAPC11Q9NYG5 84 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 CLCF1Q9UBD9 225 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 RPS6KB2Q9UBS0 482 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 PISDQ9UG56 409 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 STARD10Q9Y365 291 aa2.76□□□□□ -1.97
SMC4-225ENST00000497203 SMCO3A2RU48 225 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 KRTAP4-16G5E9R7 235 aaPredicted RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 GOSR2O14653 212 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 ERLIN1O75477 346 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 AGTP01019 485 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 INSP01308 110 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 KRT6AP02538 564 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 IGHV4-34P06331 123 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 SLC26A3P40879 764 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 GPR6P46095 362 aaPredicted RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 SUB1P53999 127 aaKnown RBP eCLIP2.75□□□□□ -1.97
SMC4-225ENST00000497203 PRMT2P55345 433 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 MRPS22P82650 360 aaKnown RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 ACVR1Q04771 509 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 DAZ2Q13117 558 aaKnown RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 KIAA0087Q14695 138 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 ZNF630Q2M218 657 aaPredicted RBP2.75□□□□□ -1.97
SMC4-225ENST00000497203 XKR7Q5GH72 579 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 RAET1LQ5VY80 246 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 CARD17Q5XLA6 110 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 CTRB2Q6GPI1 263 aa2.75□□□□□ -1.97
SMC4-225ENST00000497203 H2AFVQ71UI9 128 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms