RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 CHI3L1P36222 383 aaPredicted RBP1.52□□□□□ -2.17
VPS26A-208ENST00000497022 HPCAL1P37235 193 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 PPT1P50897 306 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 PLA2G16P53816 162 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 HMGCS1Q01581 520 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 REG3AQ06141 175 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 PJVKQ0ZLH3 352 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SMARCB1Q12824 385 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 PDK3Q15120 406 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 STK11Q15831 433 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 TTC23Q5W5X9 447 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 FAM71F2Q6NXP2 309 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF880Q6PDB4 577 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 BLOC1S2Q6QNY1 142 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 LYPD2Q6UXB3 125 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SHISA6Q6ZSJ9 500 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 KIAA1328Q86T90 577 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SLC26A11Q86WA9 606 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF547Q8IVP9 402 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 UBALD2Q8IYN6 164 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF679Q8IYX0 411 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 PGAM4Q8N0Y7 254 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 ANKFN1Q8N957 763 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 OR4D9Q8NGE8 314 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SPRYD4Q8WW59 207 aaPredicted RBP1.52□□□□□ -2.17
VPS26A-208ENST00000497022 CTNNBL1Q8WYA6 563 aaPredicted RBP1.52□□□□□ -2.17
VPS26A-208ENST00000497022 TM4SF19Q96DZ7 209 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 CCT7Q99832 543 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SPNS1Q9H2V7 528 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SRMSQ9H3Y6 488 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 LRRC40Q9H9A6 602 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 MEAF6Q9HAF1 191 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 ELOVL3Q9HB03 270 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SLC40A1Q9NP59 571 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 SIGLEC8Q9NYZ4 499 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 GNG12Q9UBI6 72 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 RNF14Q9UBS8 474 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 OR10H1Q9Y4A9 318 aa1.52□□□□□ -2.17
VPS26A-208ENST00000497022 NPIPA7E9PJI5 369 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 UBXN8O00124 270 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 OR1F1O43749 312 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 SNNO75324 88 aaPredicted RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 KLK3P07288 261 aaPredicted RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 NPIPA8P0DM63 369 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 ABOP16442 354 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 COX5AP20674 150 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 SULT1E1P49888 294 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 CACNG7P62955 275 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 PMF1Q6P1K2 205 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 Q6ZN92 141 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 LRP11Q86VZ4 500 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF683Q8IZ20 524 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 EIF1ADQ8N9N8 165 aaKnown RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 OR13C2Q8NGS9 318 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 TRMT10AQ8TBZ6 339 aaKnown RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 FAM3CQ92520 227 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 EMG1Q92979 244 aaKnown RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 CMTM7Q96FZ5 175 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 SLC41A3Q96GZ6 507 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 PSKH2Q96QS6 385 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 SECISBP2Q96T21 854 aaKnown RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 RIT2Q99578 217 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 ZBTB18Q99592 522 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 OMDQ99983 421 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 NIPSNAP3BQ9BS92 247 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 EDEM2Q9BV94 578 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 PLA2G12AQ9BZM1 189 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 VCX2Q9H322 139 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 PIPOXQ9P0Z9 390 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 NPIPA1Q9UND3 350 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 RASD1Q9Y272 281 aa1.51□□□□□ -2.17
VPS26A-208ENST00000497022 AK6Q9Y3D8 172 aaKnown RBP1.51□□□□□ -2.17
VPS26A-208ENST00000497022 NSG1A0A0A6YYJ2 146 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 C7orf66A4D0T2 115 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF233A6NK53 670 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 ZNF705GA8MUZ8 300 aaPredicted RBP1.5□□□□□ -2.17
VPS26A-208ENST00000497022 RPL36A-HNRNPH2H7BZ11 118 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 AP3B1O00203 1094 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 BTN3A3O00478 584 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 ARPC3O15145 178 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 UGT1A9O60656 530 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 SURF6O75683 361 aaKnown RBP1.5□□□□□ -2.17
VPS26A-208ENST00000497022 TPM2P07951 284 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 OMGP23515 440 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 AIF1P55008 147 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 KRTAP12-3P60328 96 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 TNFRSF17Q02223 184 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 DDX39BQ13838 428 aaKnown RBP1.5□□□□□ -2.17
VPS26A-208ENST00000497022 ZMYND11Q15326 602 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 CYTH1Q15438 398 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 GUCA2BQ16661 112 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 MICBQ29980 383 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 EXOC3L2Q2M3D2 409 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 RABL6Q3YEC7 729 aaPredicted RBP1.5□□□□□ -2.17
VPS26A-208ENST00000497022 COX19Q49B96 90 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 FILIP1LQ4L180 1135 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 TP53I3Q53FA7 332 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 SAMD4BQ5PRF9 694 aaKnown RBP1.5□□□□□ -2.17
VPS26A-208ENST00000497022 C10orf120Q5SQS8 335 aa1.5□□□□□ -2.17
VPS26A-208ENST00000497022 MARCH8Q5T0T0 291 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms