RNA–Protein interactions for RNA: ENST00000496393.2

NVL-223, Transcript of nuclear VCP-like, human

TSL 3

Gene NVL, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NVL-223	ENST00000496393	C1D	Q13901	141 aa	Known RBP	6.7	□□□□□ -1.34
NVL-223	ENST00000496393	CHI3L2	Q15782	390 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	NKPD1	Q17RQ9	610 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	WHAMMP3	Q1A5X7	153 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	GSG1	Q2KHT4	349 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	TRMT5	Q32P41	509 aa	Known RBP	6.7	□□□□□ -1.34
NVL-223	ENST00000496393	ACSM5	Q6NUN0	579 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF836	Q6ZNA1	936 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	C8orf86	Q6ZUL3	223 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	VRK2	Q86Y07	508 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	TEX29	Q8N6K0	151 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	NANP	Q8TBE9	248 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	EPS8L3	Q8TE67	593 aa	Known RBP	6.7	□□□□□ -1.34
NVL-223	ENST00000496393	OIT3	Q8WWZ8	545 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	NEURL3	Q96EH8	262 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	TSPAN32	Q96QS1	320 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF416	Q9BWM5	594 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	DPY30	Q9C005	99 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	MS4A5	Q9H3V2	200 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	PIF1	Q9H611	641 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	C7orf69	Q9H7B7	122 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	MID2	Q9UJV3	735 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	RASD1	Q9Y272	281 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	CACNG2	Q9Y698	323 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	ARHGAP32	A7KAX9	2087 aa		6.7	□□□□□ -1.34
NVL-223	ENST00000496393	FTCDNL1	E5RQL4	147 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	FAAH	O00519	579 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	NPHS1	O60500	1241 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	DEAF1	O75398	565 aa	Predicted RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	VAMP5	O95183	116 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	CLPTM1	O96005	669 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GUSB	P08236	651 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	PATE4	P0C8F1	98 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	FAM157B	P0CG42	384 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	NR2F1	P10589	423 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF43	P17038	809 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	NCF2	P19878	526 aa	Predicted RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	RPS4Y1	P22090	263 aa	Known RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GLRX	P35754	106 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GIPR	P48546	466 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	EVX1	P49640	407 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	MAP2K6	P52564	334 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	AQP5	P55064	265 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	NME5	P56597	212 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	COPZ1	P61923	177 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	CCL8	P80075	99 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	LCN2	P80188	198 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	HOXC5	Q00444	222 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	POU3F1	Q03052	451 aa	Predicted RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GLO1	Q04760	184 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GNA13	Q14344	377 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	PDCD2	Q16342	344 aa	Predicted RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	SPANXN4	Q5MJ08	99 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	COX20	Q5RI15	118 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	AP1AR	Q63HQ0	302 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	REP15	Q6BDI9	236 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	WBP2NL	Q6ICG8	309 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	RBMS3	Q6XE24	437 aa	Known RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF813	Q6ZN06	617 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	CMIP	Q8IY22	773 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	LRRC17	Q8N6Y2	441 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	IL17RD	Q8NFM7	739 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	MGARP	Q8TDB4	240 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	GTF3A	Q92664	365 aa	Known RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	RAB39B	Q96DA2	213 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	C16orf45	Q96MC5	204 aa	Predicted RBP	6.69	□□□□□ -1.34
NVL-223	ENST00000496393	OR2M2	Q96R28	347 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	KRTAP4-12	Q9BQ66	201 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	PTDSS2	Q9BVG9	487 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	TAAR3P	Q9P1P4	343 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	B3GAT1	Q9P2W7	334 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	OPN4	Q9UHM6	478 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	RCE1	Q9Y256	329 aa		6.69	□□□□□ -1.34
NVL-223	ENST00000496393	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	PRSS51	A0A1B0GVH4	220 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ISPD	A4D126	451 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	CDHR4	A6H8M9	788 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF99	A8MXY4	864 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RPL36A-HNRNPH2	H7BZ11	118 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393		M0R082	166 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TPD52L2	O43399	206 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TRAF3IP2	O43734	574 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	SPAG7	O75391	227 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RAB36	O95755	333 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	IGHV2-5	P01817	119 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	DBI	P07108	87 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	TFPT	P0C1Z6	253 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	CCL2	P13500	99 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF35	P13682	527 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ANPEP	P15144	967 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ZNF14	P17017	642 aa	Predicted RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	FPR2	P25090	351 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ACAA2	P42765	397 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	CDKN2C	P42773	168 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RAD52	P43351	418 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	ERVS71-1	P61550	626 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RPS23	P62266	143 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	SRSF4	Q08170	494 aa	Known RBP	6.68	□□□□□ -1.34
NVL-223	ENST00000496393	RAB39A	Q14964	217 aa		6.68	□□□□□ -1.34
NVL-223	ENST00000496393	MFSD13A	Q14CX5	517 aa		6.68	□□□□□ -1.34

Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms