RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 NPIPA5E9PKD4 350 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 J3QRE1 110 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 NTN3O00634 580 aaPredicted RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 MSTNO14793 375 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ZNF208O43345 1280 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 PLPP2O43688 288 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 GMFGO60234 142 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 FADS1O60427 444 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ADAM11O75078 769 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ITGA10O75578 1167 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 GATBO75879 557 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 SULT1C4O75897 302 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 DLGAP3O95886 979 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 PDGFBP01127 241 aaPredicted RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 BGLAPP02818 100 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 GYPBP06028 91 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 HNRNPCP07910 306 aaKnown RBP eCLIP6.28□□□□□ -1.4
USP39-219ENST00000496047 ASAH2BP0C7U1 165 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 PRKCAP17252 672 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SPI1P17947 270 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 EDNRAP25101 427 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 CRABP1P29762 137 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 UQCRC1P31930 480 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RPS19P39019 145 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 AQP2P41181 271 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 TSPAN7P41732 249 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 DIO1P49895 249 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 E2F1Q01094 437 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RPL18Q07020 188 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 SCN1BQ07699 218 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 BTBD16Q32M84 506 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 DCAF12Q5T6F0 453 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 FAM69BQ5VUD6 431 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 C1orf140Q5VVS0 124 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 TRIQKQ629K1 86 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 C3orf33Q6P1S2 294 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RPL22L1Q6P5R6 122 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 CBLN3Q6UW01 205 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 TMEM205Q6UW68 189 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 FAM131AQ6UXB0 335 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SLC16A9Q7RTY1 509 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 CCDC190Q86UF4 302 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SHISA5Q8N114 240 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 OR8H2Q8N162 312 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 PARP16Q8N5Y8 322 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ZFP41Q8N8Y5 198 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 GDPD1Q8N9F7 314 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 APCDD1LQ8NCL9 501 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 OR4K17Q8NGC6 315 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 M1APQ8TC57 530 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SLC25A43Q8WUT9 341 aaPredicted RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 TM9SF4Q92544 642 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SLC25A36Q96CQ1 311 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RASD2Q96D21 266 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SMIM19Q96E16 107 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ZMYND19Q96E35 227 aaPredicted RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 DIRAS2Q96HU8 199 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 MRGPRX4Q96LA9 322 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 KLHL15Q96M94 604 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 C5orf34Q96MH7 638 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ALG12Q9BV10 488 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 MROQ9BYG7 248 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ULBP3Q9BZM4 244 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 TPK1Q9H3S4 243 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RNF167Q9H6Y7 350 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RPRD1BQ9NQG5 326 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 FSCN3Q9NQT6 498 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SLC39A1Q9NY26 324 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RABL2AQ9UBK7 228 aaPredicted RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 LAMP5Q9UJQ1 280 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 GNG8Q9UK08 70 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 NPIPA1Q9UND3 350 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 RABL2BQ9UNT1 228 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 TRAPPC4Q9Y296 219 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 SF3B6Q9Y3B4 125 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 PTRH2Q9Y3E5 179 aaKnown RBP6.28□□□□□ -1.4
USP39-219ENST00000496047 WIF1Q9Y5W5 379 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 FKBP7Q9Y680 259 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 PMF1-BGLAPU3KQ54 211 aa6.28□□□□□ -1.4
USP39-219ENST00000496047 ASH1LQ9NR48 2969 aaKnown RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 DOCK10Q96BY6 2186 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TNFSF12-TNFSF13A0A0A6YY99 330 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 NSG1A0A0A6YYJ2 146 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 IGHV3-20A0A0C4DH32 117 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 A0A1B0GVG6 124 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 A0A1W2PQL4 384 aaPredicted RBP6.27□□□□□ -1.41
USP39-219ENST00000496047 TMEM72A0PK05 275 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FABP12A6NFH5 140 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 CD8B2A6NJW9 211 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 CENPBD1B2RD01 187 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FAM25AB3EWG3 89 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FAM25CB3EWG5 89 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 FAM25GB3EWG6 89 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 C11orf98E9PRG8 122 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 WWP2O00308 870 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 SEC14L5O43304 696 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TMCC2O75069 709 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 TIAF1O95411 115 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 IGHMP01871 453 aa6.27□□□□□ -1.41
USP39-219ENST00000496047 HLA-DQA2P01906 255 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms