RNA–Protein interactions for RNA: ENST00000496037.1

SMARCAL1-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 542 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-213ENST00000496037 SCO2A0A1W2PP80 73 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 ISPDA4D126 451 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MEGF11A6BM72 1044 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CXorf49A8MYA2 514 aaPredicted RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MYO1GB0I1T2 1018 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF587BE7ETH6 402 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 C3orf84H3BNL1 204 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 NR5A2O00482 541 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 DNPH1O43598 174 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 PCDH7O60245 1069 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 KCNK2O95069 426 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 NKX2-2O95096 273 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 LGI1O95970 557 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CLEC3BP05452 202 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CCDC159P0C7I6 412 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 ELK3P41970 407 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 RAD23AP54725 363 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 ALDH18A1P54886 795 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 RPL15P61313 204 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CD69Q07108 199 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CBFBQ13951 182 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 FRG1Q14331 258 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAD2L1BPQ15013 274 aaPredicted RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 TECRLQ5HYJ1 363 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 STEAP4Q687X5 459 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 RAB12Q6IQ22 244 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 TTC27Q6P3X3 843 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 FDX2Q6P4F2 183 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 THAP5Q7Z6K1 395 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 PXKQ7Z7A4 578 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MYPOPQ86VE0 399 aaPredicted RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CDRT4Q8N9R6 151 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR52E2Q8NGJ4 325 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 LINC01006Q8NI28 216 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 SELENOMQ8WWX9 145 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAGOHBQ96A72 148 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 ELP4Q96EB1 424 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 JAM3Q9BX67 310 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 CHIAQ9BZP6 476 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MARCH7Q9H992 704 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 BRF2Q9HAW0 419 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 LEF1Q9UJU2 399 aaPredicted RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 MTO1Q9Y2Z2 717 aaKnown RBP8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 FLVCR1Q9Y5Y0 555 aa8.14□□□□□ -1.11
SMARCAL1-213ENST00000496037 IGHV1-69-2A0A0G2JMI3 117 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 AGAP5A6NIR3 686 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 XPNPEP2O43895 674 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 PMS2P2O95744 297 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 IGHMP01871 453 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 IGHV4-38-2P0DP08 117 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 PRPS2P11908 318 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 ATP6V1C1P21283 382 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 NR4A1P22736 598 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAGEB1P43366 347 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 RPS23P62266 143 aaKnown RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRIM25Q14258 630 aaKnown RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 NKPD1Q17RQ9 610 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF674Q2M3X9 581 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 C2orf76Q3KRA6 126 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 KHDC1LQ5JSQ8 128 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 GKAP1Q5VSY0 366 aaPredicted RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF620Q6ZNG0 422 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 AAED1Q7RTV5 226 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 PDIK1LQ8N165 341 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF614Q8N883 585 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 COX18Q8N8Q8 333 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 MAGEE2Q8TD90 523 aaPredicted RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 DNAJA3Q96EY1 480 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 MOGAT1Q96PD6 335 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 ALKBH3Q96Q83 286 aaPredicted RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 NAPGQ99747 312 aaPredicted RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 MIEF1Q9NQG6 463 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 MMP26Q9NRE1 261 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 SLC6A13Q9NSD5 602 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 FARSBQ9NSD9 589 aaKnown RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 FBXL7Q9UJT9 491 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 GRID1Q9ULK0 1009 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 LYVE1Q9Y5Y7 322 aa8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 SOX21Q9Y651 276 aaPredicted RBP8.13□□□□□ -1.11
SMARCAL1-213ENST00000496037 TRAV40A0A0B4J280 105 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR7A17O14581 309 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 EIF3HO15372 352 aaKnown RBP eCLIP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 GSC2O15499 205 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 APOL3O95236 402 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 PPP1R3DO95685 299 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 PDYNP01213 254 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CBR1P16152 277 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZNF12P17014 697 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 FSTP19883 344 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ARR3P36575 388 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 PSMB10P40306 273 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ASMTP46597 345 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 PRKAG1P54619 331 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 OR2B6P58173 313 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CCL8P80075 99 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 CKAP4Q07065 602 aaKnown RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 MERTKQ12866 999 aa8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 ZKSCAN8Q15776 578 aaPredicted RBP8.12□□□□□ -1.11
SMARCAL1-213ENST00000496037 HFEQ30201 348 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms