RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 SQLEQ14534 574 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 MS4A18Q3C1V0 323 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 COMTD1Q86VU5 262 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 MSRB3Q8IXL7 192 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 C20orf196Q8IYI0 205 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 ZNF786Q8N393 782 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 CKAP2Q8WWK9 683 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 HPS1Q92902 700 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 TLCD1Q96CP7 247 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 LRR1Q96L50 414 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 EPYCQ99645 322 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 C19orf24Q9BVV8 132 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 NOX3Q9HBY0 568 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 DYNLRB1Q9NP97 96 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 B3GNT2Q9NY97 397 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 SELENONQ9NZV5 590 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 TESQ9UGI8 421 aaKnown RBP20.09■□□□□ 0.81
COL27A1-208ENST00000494780 GMEB1Q9Y692 573 aa20.09■□□□□ 0.81
COL27A1-208ENST00000494780 A0A087WUJ7 227 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 LRP5LA4QPB2 252 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 SEC14L2O76054 403 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 HPRP00739 348 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 NQO1P15559 274 aaKnown RBP20.08■□□□□ 0.81
COL27A1-208ENST00000494780 CBLP22681 906 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 NCALDP61601 193 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 SNTB2Q13425 540 aaKnown RBP20.08■□□□□ 0.81
COL27A1-208ENST00000494780 ADRM1Q16186 407 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 PHYHD1Q5SRE7 291 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 BLOC1S3Q6QNY0 202 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 SCAIQ8N9R8 606 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 SOX7Q9BT81 388 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 ASPNQ9BXN1 380 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 TMEM27Q9HBJ8 222 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 B3GAT2Q9NPZ5 323 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 TCF7L2Q9NQB0 619 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 CMAHPQ9Y471 501 aa20.08■□□□□ 0.81
COL27A1-208ENST00000494780 PRORSD1PA6NEY8 169 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 TPST1O60507 370 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 TGDSO95455 350 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 NR4A1P22736 598 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 RGS8P57771 180 aaPredicted RBP20.07■□□□□ 0.8
COL27A1-208ENST00000494780 POU3F1Q03052 451 aaPredicted RBP20.07■□□□□ 0.8
COL27A1-208ENST00000494780 CR1LQ2VPA4 569 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 CARD17Q5XLA6 110 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 KRT80Q6KB66 452 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 ZNF627Q7L945 461 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 FUNDC1Q8IVP5 155 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 CDK20Q8IZL9 346 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 ZCCHC24Q8N2G6 241 aaKnown RBP20.07■□□□□ 0.8
COL27A1-208ENST00000494780 UBASH3BQ8TF42 649 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 EMC6Q9BV81 110 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 EVA1AQ9H8M9 152 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 SLAMF8Q9P0V8 285 aa20.07■□□□□ 0.8
COL27A1-208ENST00000494780 A0A0B4J2E0 115 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 A0A1B0GX12 115 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 SH3PXD2BA1X283 911 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 POLR3GO15318 223 aaPredicted RBP20.06■□□□□ 0.8
COL27A1-208ENST00000494780 LILRA1O75019 489 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 HLA-HP01893 362 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 BGLAPP02818 100 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 IGFBP1P08833 259 aaPredicted RBP20.06■□□□□ 0.8
COL27A1-208ENST00000494780 HLA-DOBP13765 273 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 EVX1P49640 407 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 OR1Q1Q15612 314 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 GSG1Q2KHT4 349 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 GLIPR1L2Q4G1C9 344 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 NHLRC1Q6VVB1 395 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 SNX32Q86XE0 403 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 C10orf111Q8N326 155 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 BHLHE22Q8NFJ8 381 aaPredicted RBP20.06■□□□□ 0.8
COL27A1-208ENST00000494780 RNF217Q8TC41 542 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 SPDL1Q96EA4 605 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 C7orf26Q96N11 449 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 ZNF607Q96SK3 696 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 TMEM38AQ9H6F2 299 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 TMBIM4Q9HC24 238 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 MRPL39Q9NYK5 338 aaKnown RBP20.06■□□□□ 0.8
COL27A1-208ENST00000494780 VAPAQ9P0L0 249 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 NOX1Q9Y5S8 564 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 SVEP1Q4LDE5 3571 aa20.06■□□□□ 0.8
COL27A1-208ENST00000494780 ADRA2AP08913 450 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 CD79AP11912 226 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 SLC6A2P23975 617 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 PMS2P3Q13401 168 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 RIN1Q13671 783 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 SCARB2Q14108 478 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 PAGE3Q5JUK9 113 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 ZNF813Q6ZN06 617 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 LINC01356Q8N9X3 169 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 MRPL24Q96A35 216 aaKnown RBP20.05■□□□□ 0.8
COL27A1-208ENST00000494780 DENND2DQ9H6A0 471 aaPredicted RBP20.05■□□□□ 0.8
COL27A1-208ENST00000494780 MED29Q9NX70 200 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 CCDC167Q9P0B6 97 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 SLC13A4Q9UKG4 626 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 CORO2BQ9UQ03 480 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 POFUT2Q9Y2G5 429 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 SPEF1Q9Y4P9 236 aa20.05■□□□□ 0.8
COL27A1-208ENST00000494780 TRBV5-3A0A0A0MS03 114 aa20.04■□□□□ 0.8
COL27A1-208ENST00000494780 ZNF726A6NNF4 738 aa20.04■□□□□ 0.8
COL27A1-208ENST00000494780 ZNF500O60304 480 aaPredicted RBP20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms