RNA–Protein interactions for RNA: ENST00000494464.5

ERCC3-209, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 1,367 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-209ENST00000494464 IGHV1-2P23083 117 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 RAD23AP54725 363 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 TSC22D1Q15714 1073 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 KCTD21Q4G0X4 260 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 TTC23Q5W5X9 447 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 FBXW9Q5XUX1 488 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 DHRS4L2Q6PKH6 230 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 SEZ6L2Q6UXD5 910 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF704Q6ZNC4 412 aaPredicted RBP11.65□□□□□ -0.55
ERCC3-209ENST00000494464 ATG4DQ86TL0 474 aaPredicted RBP11.65□□□□□ -0.55
ERCC3-209ENST00000494464 KRT73Q86Y46 540 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 CCDC103Q8IW40 242 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 LRRC75A-AS1Q8N1F1 130 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 CYGBQ8WWM9 190 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF775Q96BV0 537 aaPredicted RBP11.65□□□□□ -0.55
ERCC3-209ENST00000494464 MRPS26Q9BYN8 205 aaKnown RBP11.65□□□□□ -0.55
ERCC3-209ENST00000494464 C12orf10Q9HB07 376 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 PCDHGB5Q9Y5G0 923 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 ORC6Q9Y5N6 252 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 MAGED1Q9Y5V3 778 aaPredicted RBP11.65□□□□□ -0.55
ERCC3-209ENST00000494464 FLVCR1Q9Y5Y0 555 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 ENPP4Q9Y6X5 453 aa11.65□□□□□ -0.55
ERCC3-209ENST00000494464 AQP7P3A6NL99 342 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 FZD7O75084 574 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 SERPINB7O75635 380 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 LYZL6O75951 148 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 IFNW1P05000 195 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 RPS6KA3P51812 740 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 ADAM8P78325 824 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 IL18R1Q13478 541 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 APOFQ13790 326 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 SLC17A1Q14916 467 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 TIMM23BQ5SRD1 257 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 FAHD1Q6P587 224 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.64□□□□□ -0.55
ERCC3-209ENST00000494464 P2RY8Q86VZ1 359 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 KRTAP1-3Q8IUG1 177 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 HS3ST5Q8IZT8 346 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 LSMEM1Q8N8F7 131 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 STK35Q8TDR2 534 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 IGFBPL1Q8WX77 278 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 TMEM45BQ96B21 275 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 MBOAT4Q96T53 435 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 CCL19Q99731 98 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 SF3B5Q9BWJ5 86 aaKnown RBP11.64□□□□□ -0.55
ERCC3-209ENST00000494464 RSPO3Q9BXY4 272 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-209ENST00000494464 TOR3AQ9H497 397 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 ESRP2Q9H6T0 727 aaKnown RBP11.64□□□□□ -0.55
ERCC3-209ENST00000494464 SMURF2Q9HAU4 748 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 TMEFF2Q9UIK5 374 aaPredicted RBP11.64□□□□□ -0.55
ERCC3-209ENST00000494464 MYRFQ9Y2G1 1151 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 U3KQV3 271 aa11.64□□□□□ -0.55
ERCC3-209ENST00000494464 VPS13CQ709C8 3753 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 DPPA5A6NC42 116 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 ARRDC5A6NEK1 342 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 TRIM64A6NGJ6 449 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 SLC16A6O15403 523 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 TMCC2O75069 709 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 MRPL33O75394 65 aaKnown RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 GNAO1P09471 354 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 CD99P14209 185 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 RHCEP18577 417 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 CDH2P19022 906 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 IGFBP5P24593 272 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 HOXC12P31275 282 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 RRM2P31350 389 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 NTF4P34130 210 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 FOXD4Q12950 439 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 OR7A5Q15622 319 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 NCMAPQ5T1S8 102 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 C1orf140Q5VVS0 124 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 KDM4DQ6B0I6 523 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 ADAM5Q6NVV9 412 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 C5orf46Q6UWT4 87 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 CASP12Q6UXS9 341 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 LSRQ86X29 649 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF433Q8N7K0 673 aaPredicted RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 ZNF555Q8NEP9 628 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 GPR32P1Q8NGA4 272 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 OR4C15Q8NGM1 316 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 PROX1Q92786 737 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 TAPBPLQ9BX59 468 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 YTHDF1Q9BYJ9 559 aaKnown RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 EVA1AQ9H8M9 152 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 PARPBPQ9NWS1 579 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 FAM118AQ9NWS6 357 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 ASB6Q9NWX5 421 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 TAS2R16Q9NYV7 291 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 TESQ9UGI8 421 aaKnown RBP11.63□□□□□ -0.55
ERCC3-209ENST00000494464 RNF115Q9Y4L5 304 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 LYVE1Q9Y5Y7 322 aa11.63□□□□□ -0.55
ERCC3-209ENST00000494464 DSCAMO60469 2012 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 OR5H1A6NKK0 313 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 FTCDNL1E5RQL4 147 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 TNFRSF11BO00300 401 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 HS3ST1O14792 307 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 SMPD2O60906 423 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 DIRAS1O95057 198 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 VAMP5O95183 116 aa11.62□□□□□ -0.55
ERCC3-209ENST00000494464 AHSA1O95433 338 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms