RNA–Protein interactions for RNA: ENST00000494028.1

CLCN6-208, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 5

Gene CLCN6, Length 773 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-208ENST00000494028 TRAM1Q15629 374 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF79Q15937 498 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 ACKR1Q16570 336 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SPANXN2Q5MJ10 180 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF684Q5T5D7 378 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 EEF1A1P5Q5VTE0 462 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SLC6A19Q695T7 634 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 PLEKHG7Q6ZR37 379 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SLC16A9Q7RTY1 509 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 PPP1R32Q7Z5V6 425 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 FADS6Q8N9I5 356 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 NLGN4YQ8NFZ3 816 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-208ENST00000494028 OR2T4Q8NH00 348 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 M1APQ8TC57 530 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 RHBDD1Q8TEB9 315 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 CT55Q8WUE5 264 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 AP3S1Q92572 193 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SLC25A36Q96CQ1 311 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SMIM19Q96E16 107 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 CMKLR1Q99788 373 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 SYT4Q9H2B2 425 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 MARCH7Q9H992 704 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 ABCB10Q9NRK6 738 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 GRHPRQ9UBQ7 328 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 MOKQ9UQ07 419 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 VDAC3Q9Y277 283 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 TRAPPC4Q9Y296 219 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 PCDHGB7Q9Y5F8 929 aa9.61□□□□□ -0.87
CLCN6-208ENST00000494028 CHCHD2Q9Y6H1 151 aaPredicted RBP9.61□□□□□ -0.87
CLCN6-208ENST00000494028 IGLV1-36A0A0B4J1U3 117 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 A0A0G2JK05 382 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 A0A1W2PRG6 482 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ISPDA4D126 451 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TVP23AA6NH52 213 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 NPIPB13A6NJU9 1138 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 NPIPB4C9JG80 1138 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF208O43345 1280 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CBFA2T3O75081 653 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ITGA10O75578 1167 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 NCR1O76036 304 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 AKR7A3O95154 331 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CD1AP06126 327 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 IMPDH2P12268 514 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 F8A1P23610 371 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 MSX1P28360 303 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 APOBEC1P41238 236 aaKnown RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CASP3P42574 277 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF41P51814 821 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 GBX2P52951 348 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 RPL27P61353 136 aaKnown RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 INSM1Q01101 510 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TCF15Q12870 199 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 SF3A2Q15428 464 aaKnown RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TRIM16LQ309B1 348 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 FAM27D1Q5T7N8 215 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CDCP2Q5VXM1 449 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 STEAP3Q658P3 488 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TMEM81Q6P7N7 255 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 PXKQ7Z7A4 578 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 NR2C2APQ86WQ0 139 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CDC20BQ86Y33 519 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 PM20D2Q8IYS1 436 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 SCAIQ8N9R8 606 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ZNF511Q8NB15 262 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 OR11G2Q8NGC1 345 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 MFSD8Q8NHS3 518 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 THAP4Q8WY91 577 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 RNF166Q96A37 237 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 MRPL48Q96GC5 212 aaKnown RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 LIN37Q96GY3 246 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ARL5BQ96KC2 179 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 MRGPRX4Q96LA9 322 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ATF6BQ99941 703 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CCDC32Q9BV29 185 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 SRRQ9GZT4 340 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 KCNN2Q9H2S1 579 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TXNIPQ9H3M7 391 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 TPK1Q9H3S4 243 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 CPNE5Q9HCH3 593 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ABCB9Q9NP78 766 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 POLE4Q9NR33 117 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 ALKBH4Q9NXW9 302 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 VSX1Q9NZR4 365 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 AKAP7Q9P0M2 348 aaPredicted RBP9.6□□□□□ -0.87
CLCN6-208ENST00000494028 PISDQ9UG56 409 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 GNG8Q9UK08 70 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 FKBP7Q9Y680 259 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 GPR179Q6PRD1 2367 aa9.6□□□□□ -0.87
CLCN6-208ENST00000494028 NSG1A0A0A6YYJ2 146 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 A0A1W2PNU3 283 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 A0A1W2PNV4 684 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 DLL1O00548 723 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 CDX4O14627 284 aaPredicted RBP9.59□□□□□ -0.87
CLCN6-208ENST00000494028 RGS5O15539 181 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 ARHGEF9O43307 516 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 OR2T1O43869 369 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 IGHEP01854 428 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 OR8G3PP0DMU2 310 aa9.59□□□□□ -0.87
CLCN6-208ENST00000494028 MYL9P24844 172 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms