RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 SLC17A7Q9P2U7 560 aa10.61□□□□□ -0.71
BRCA1-222ENST00000493919 SMPXQ9UHP9 88 aa10.61□□□□□ -0.71
BRCA1-222ENST00000493919 LEF1Q9UJU2 399 aaPredicted RBP10.61□□□□□ -0.71
BRCA1-222ENST00000493919 SLC22A31A6NKX4 558 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SSX4O60224 188 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 CDC14BO60729 498 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PRAMEF10O60809 474 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ERGP11308 486 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 CD1DP15813 335 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ZNF10P21506 573 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 BGNP21810 368 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 S100A2P29034 98 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 GLRBP48167 497 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 TDGF1P3P51864 188 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 HSD11B2P80365 405 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SCN1BQ07699 218 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 TUBB3Q13509 450 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 RTP5Q14D33 572 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 INPP5JQ15735 1006 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 DEFB110Q30KQ9 67 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 MTX3Q5HYI7 312 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 KHDRBS2Q5VWX1 349 aaKnown RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 AGTRAPQ6RW13 159 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SHISA2Q6UWI4 295 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 OR52J3Q8NH60 311 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 FLVCR1-AS1Q8TAF5 88 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ACOT12Q8WYK0 555 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ZC3HAV1LQ96H79 300 aaKnown RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SLC38A2Q96QD8 506 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SLITRK2Q9H156 845 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ALG9Q9H6U8 611 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 LPAR2Q9HBW0 351 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 APMAPQ9HDC9 416 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 LHX9Q9NQ69 397 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 THSD1Q9NS62 852 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ZNF701Q9NV72 531 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 C5AR2Q9P296 337 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 KCNG2Q9UJ96 466 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 GNG8Q9UK08 70 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ASB1Q9Y576 335 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ZZEF1O43149 2961 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ACACBO00763 2458 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 A0A087X1B8 175 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 A0A1W2PPV9 198 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 AP4M1O00189 453 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 CCL2P13500 99 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 FOLR1P15328 257 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SRMP19623 302 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SLC6A1P30531 599 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 KLF3P57682 345 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 MC2RQ01718 297 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 NR6A1Q15406 480 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PYY3Q5JQD4 70 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 LGSNQ5TDP6 509 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 RNF165Q6ZSG1 346 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 CCDC190Q86UF4 302 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 KMT5CQ86Y97 462 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 AQP11Q8NBQ7 271 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 OR5M8Q8NGP6 311 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 OR5R1Q8NH85 324 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 HMGCLL1Q8TB92 370 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 ADAMTS15Q8TE58 950 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 XAGE5Q8WWM1 108 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 HSD17B8Q92506 261 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PYCR2Q96C36 320 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SLC41A2Q96JW4 573 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PTCHD1Q96NR3 888 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 NIPSNAP1Q9BPW8 284 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 MESP1Q9BRJ9 268 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 TMEM121BQ9BXQ6 578 aaPredicted RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PPP1R3EQ9H7J1 279 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 PTGES2Q9H7Z7 377 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 METTL7AQ9H8H3 244 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 SIDT1Q9NXL6 827 aaKnown RBP10.6□□□□□ -0.71
BRCA1-222ENST00000493919 MGAT4CQ9UBM8 478 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 OARD1Q9Y530 152 aa10.6□□□□□ -0.71
BRCA1-222ENST00000493919 A0A1B0GV72 72 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 TMEM72A0PK05 275 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 FABP12A6NFH5 140 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 CLDN24A6NM45 220 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 A8MWP6 167 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 IFNA21P01568 189 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 PPP3CBP16298 524 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 CMPK1P30085 196 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 MAS1LP35410 378 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 EVX1P49640 407 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 ERVS71-1P61550 626 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 YBX1P67809 324 aaKnown RBP10.59□□□□□ -0.71
BRCA1-222ENST00000493919 EMX2Q04743 252 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 OR4D1Q15615 310 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 ATP6V1FQ16864 119 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 PIGGQ5H8A4 983 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 UQCC3Q6UW78 93 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 C6orf15Q6UXA7 325 aaPredicted RBP10.59□□□□□ -0.71
BRCA1-222ENST00000493919 TRIM46Q7Z4K8 759 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 ADCK2Q7Z695 626 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 BMPERQ8N8U9 685 aa10.59□□□□□ -0.71
BRCA1-222ENST00000493919 HSD17B11Q8NBQ5 300 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms