RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 ROGDIQ9GZN7 287 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 POLE4Q9NR33 117 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 RBAKQ9NYW8 714 aaPredicted RBP2.25□□□□□ -2.05
SMC4-223ENST00000493695 BFARQ9NZS9 450 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 SLC25A15Q9Y619 301 aa2.25□□□□□ -2.05
SMC4-223ENST00000493695 KANK1Q14678 1352 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 IGLV3-22A0A075B6J6 115 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 FAM240BA0A1B0GVZ2 78 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 PCP4L1A6NKN8 68 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 OR52A4PA6NMU1 304 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 C12orf71A8MTZ7 269 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 PES1O00541 588 aaKnown RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 B4GALT2O60909 372 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 TNFSF13O75888 250 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 KLF8O95600 359 aaPredicted RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 IGHV2-5P01817 119 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 MMP1P03956 469 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 GAPDHP04406 335 aaKnown RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 GSSP48637 474 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 SEC61GP60059 68 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 FRMPD2BQ6IN97 320 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 PMF1Q6P1K2 205 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 Q6ZN92 141 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 ECHDC2Q86YB7 292 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 OR4F15Q8NGB8 312 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 OR51G1Q8NGK1 321 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 MARCH1Q8TCQ1 289 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 PYROXD1Q8WU10 500 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 GIMAP1Q8WWP7 306 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 NT5C3BQ969T7 300 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 CNN2Q99439 309 aaKnown RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 SLC39A3Q9BRY0 314 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 NAT9Q9BTE0 207 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 AZI2Q9H6S1 392 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 SIAEQ9HAT2 523 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 NMRAL1Q9HBL8 299 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 SGK2Q9HBY8 427 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 DMAP1Q9NPF5 467 aaPredicted RBP2.24□□□□□ -2.05
SMC4-223ENST00000493695 CALYQ9NYX4 217 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 SLC25A37Q9NYZ2 338 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 KCNIP1Q9NZI2 227 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 TRAPPC4Q9Y296 219 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 KCNIP3Q9Y2W7 256 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 WSB1Q9Y6I7 421 aa2.24□□□□□ -2.05
SMC4-223ENST00000493695 CDHR2Q9BYE9 1310 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 A0A0U1RQS6 177 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 LRCOL1A6NCL2 159 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 RBMY1BA6NDE4 496 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 A6NDX4 124 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 RBMY1EA6NEQ0 496 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 PEX7O00628 323 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 UPK3AO75631 287 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 OR7A10O76100 309 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 C1orf105O95561 183 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 RBMY1DP0C7P1 496 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 RBMY1A1P0DJD3 496 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 IGHV3-43DP0DP04 118 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 CDH4P55283 916 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 RPL23AP62750 156 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 ACVR1Q04771 509 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 PPIL2Q13356 520 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 PLD1Q13393 1074 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 LRRC10Q5BKY1 277 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 CTSL3PQ5NE16 218 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 OR2A2Q6IF42 318 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 C6orf120Q7Z4R8 191 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 CAMK2N1Q7Z7J9 78 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 PLA2G4DQ86XP0 818 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 ZADH2Q8N4Q0 377 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 Q8N9W7 124 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 FNDC5Q8NAU1 212 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 OR1L4Q8NGR5 311 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 OR2G3Q8NGZ4 309 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 SMARCD2Q92925 531 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.23□□□□□ -2.05
SMC4-223ENST00000493695 ZNF641Q96N77 438 aaPredicted RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 ZBTB18Q99592 522 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 GBA3Q9H227 469 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 PPA2Q9H2U2 334 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 NECAP2Q9NVZ3 263 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 SPATA7Q9P0W8 599 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 STOX2Q9P2F5 926 aaPredicted RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 NUFIP1Q9UHK0 495 aaKnown RBP2.23□□□□□ -2.05
SMC4-223ENST00000493695 ASB3Q9Y575 518 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 PEX16Q9Y5Y5 336 aa2.23□□□□□ -2.05
SMC4-223ENST00000493695 WDR62O43379 1518 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 IGLV4-60A0A075B6I1 120 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 HAS3O00219 553 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 FOXE1O00358 373 aaPredicted RBP2.22□□□□□ -2.05
SMC4-223ENST00000493695 LAD1O00515 517 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 RIPK2O43353 540 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 IGLV2-23P01705 113 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 ADRB3P13945 408 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 ETS2P15036 469 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 PTMSP20962 102 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 CCNCP24863 283 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 EPS15P42566 896 aa2.22□□□□□ -2.05
SMC4-223ENST00000493695 FGF8P55075 233 aaPredicted RBP2.22□□□□□ -2.05
SMC4-223ENST00000493695 IRX3P78415 501 aaPredicted RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms