RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 ADAM10O14672 748 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 CLN5O75503 358 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 DFFBO76075 338 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 GNB3P16520 340 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SNCAP37840 140 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 ADPRMQ3LIE5 342 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 LYSMD2Q8IV50 215 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 STACQ99469 402 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SLC39A9Q9NUM3 307 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 PCDHB10Q9UN67 800 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 PVRP15151 417 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 FKBP2P26885 142 aaKnown RBP18.62■□□□□ 0.57
RNF40-203ENST00000493683 BLVRBP30043 206 aaPredicted RBP18.62■□□□□ 0.57
RNF40-203ENST00000493683 HNF4GQ14541 408 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 STK11Q15831 433 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 RNLSQ5VYX0 342 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SLC48A1Q6P1K1 146 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 TMPRSS7Q7RTY8 843 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 GDF7Q7Z4P5 450 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 TMEM130Q8N3G9 435 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 FGF13Q92913 245 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SMCO4Q9NRQ5 59 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 CCDC163A0A0D9SF12 145 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 A0A1B0GWA3 101 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 A8MVM7 634 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 F6UZH7 168 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SLCO2B1O94956 709 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 NFYBP25208 207 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 LBX1P52954 281 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SLC23A2Q9UGH3 650 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 TMED7-TICAM2A0A0A6YYA0 188 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 APEX1P27695 318 aaKnown RBP18.62■□□□□ 0.57
RNF40-203ENST00000493683 DUSP6Q16828 381 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 PAQR9Q6ZVX9 377 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 SKA3Q8IX90 412 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 TMED7Q9Y3B3 224 aa18.62■□□□□ 0.57
RNF40-203ENST00000493683 GLCEO94923 617 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 GRB2P62993 217 aaKnown RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 FCN2Q15485 313 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 TMEM176BQ3YBM2 270 aaPredicted RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 TMEM200AQ86VY9 491 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 FAM213BQ8TBF2 198 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 ST7LQ8TDW4 575 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 MUCL1Q96DR8 90 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 NIPSNAP3BQ9BS92 247 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 ZNF416Q9BWM5 594 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 GALNT9Q9HCQ5 603 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 PDE4DIPQ5VU43 2346 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 HLA-HP01893 362 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 IKZF1Q13422 519 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 DMBX1Q8NFW5 382 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 RBPMSQ93062 196 aaKnown RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 PBX4Q9BYU1 374 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 PUS1Q9Y606 427 aaKnown RBP eCLIP18.61■□□□□ 0.57
RNF40-203ENST00000493683 CALCBP10092 127 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 GJA5P36382 358 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 CLDN17P56750 224 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 MRPS34P82930 218 aaKnown RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 ZP2Q05996 745 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 CRMP1Q14194 572 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 ZMAT1Q5H9K5 638 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 FAM71E1Q6IPT2 247 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 RNF175Q8N4F7 328 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 FAM3DQ96BQ1 224 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 MED20Q9H944 212 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 SCPEP1Q9HB40 452 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 TRABD2BA6NFA1 517 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 HEPHL1Q6MZM0 1159 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 TRNP1Q6NT89 227 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 EXOSC3Q9NQT5 275 aaKnown RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 CXXC1Q9P0U4 656 aaPredicted RBP18.61■□□□□ 0.57
RNF40-203ENST00000493683 B3GAT1Q9P2W7 334 aa18.61■□□□□ 0.57
RNF40-203ENST00000493683 TNFSF12-TNFSF13A0A0A6YY99 330 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 TNFSF12O43508 249 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 UTS2O95399 124 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 EEF1A2Q05639 463 aaKnown RBP18.6■□□□□ 0.57
RNF40-203ENST00000493683 RBPJQ06330 500 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 ABHD6Q9BV23 337 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 ISYNA1Q9NPH2 558 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP18.6■□□□□ 0.57
RNF40-203ENST00000493683 NECAP2Q9NVZ3 263 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 CCDC88AQ3V6T2 1871 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 MAOBP27338 520 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 LGI3Q8N145 548 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 PGBD5Q8N414 524 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 MZB1Q8WU39 189 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 USB1Q9BQ65 265 aaKnown RBP18.6■□□□□ 0.57
RNF40-203ENST00000493683 SELENOIQ9C0D9 397 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 OR52A1Q9UKL2 312 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 POM121CA8CG34 1229 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 BET1O15155 118 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 HLA-DOBP13765 273 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 SSR4P51571 173 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 HSF5Q4G112 596 aaPredicted RBP18.6■□□□□ 0.57
RNF40-203ENST00000493683 OR52W1Q6IF63 320 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 TMEM64Q6YI46 380 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 ESPNLQ6ZVH7 1005 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 HIST2H3AQ71DI3 136 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 PRSS35Q8N3Z0 413 aa18.6■□□□□ 0.57
RNF40-203ENST00000493683 C15orf54Q8N8G6 183 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms