RNA–Protein interactions for RNA: ENST00000493348.1

TM4SF1-204, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2

Gene TM4SF1, Length 976 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-204ENST00000493348 GK3PQ14409 553 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 MS4A18Q3C1V0 323 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SFRP5Q5T4F7 317 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ANKRD34AQ69YU3 496 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 OR2T5Q6IEZ7 315 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 PODNL1Q6PEZ8 512 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ZNF474Q6S9Z5 364 aaPredicted RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SLC35D2Q76EJ3 337 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 PIWIL3Q7Z3Z3 882 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 TSPYL5Q86VY4 417 aaPredicted RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 TMEM200AQ86VY9 491 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 OR4K5Q8NGD3 323 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 OR2T29Q8NH02 315 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 OR51A7Q8NH64 312 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 LINC01560Q8TB33 94 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SLC7A13Q8TCU3 470 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 HSD17B8Q92506 261 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ZNF566Q969W8 418 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ZC3HAV1LQ96H79 300 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 FAM46AQ96IP4 442 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 DACH2Q96NX9 599 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ZNF385AQ96PM9 386 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 CHID1Q9BWS9 393 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ACTR6Q9GZN1 396 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 OR10A4Q9H209 315 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 HEATR1Q9H583 2144 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 ZNF556Q9HAH1 456 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 MEPEQ9NQ76 525 aaPredicted RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 NPDC1Q9NQX5 325 aaPredicted RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 C20orf141Q9NUB4 165 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 TAS2R16Q9NYV7 291 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SEC14L4Q9UDX3 406 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SLC7A8Q9UHI5 535 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 PRSS50Q9UI38 385 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 EDARQ9UNE0 448 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 POFUT2Q9Y2G5 429 aa7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 SAMHD1Q9Y3Z3 626 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 FLNBO75369 2602 aaKnown RBP7.2□□□□□ -1.26
TM4SF1-204ENST00000493348 CACNA1DQ01668 2161 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TRAV27A0A087WT01 109 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TCRBV5S2A0A599 114 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SH3PXD2BA1X283 911 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SLC35F4A4IF30 521 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 UNC119BA6NIH7 251 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 A6NIZ1 184 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 M0R3G1 203 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ACOT8O14734 319 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 FFAR1O14842 300 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CLOCKO15516 846 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 DEAF1O75398 565 aaPredicted RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RAD51DO75771 328 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 GOSR1O95249 250 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 WNT11O96014 354 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SEMG1P04279 462 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 F13BP05160 661 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ASAH2BP0C7U1 165 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 IFNGR1P15260 489 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 PSMB1P20618 241 aaKnown RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 AQP2P41181 271 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CAPZA2P47755 286 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SELENOPP49908 381 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 P2RY4P51582 365 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RPS6KA3P51812 740 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SH3BGRP55822 239 aaPredicted RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CTXN1P60606 82 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 UBE2NP61088 152 aaKnown RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RAP1BP61224 184 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RAP1AP62834 184 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TLE4Q04727 773 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 LTBQ06643 244 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RPL18Q07020 188 aaKnown RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TOP3AQ13472 1001 aaPredicted RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CAMK2DQ13557 499 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ZBED5Q49AG3 693 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TSPO2Q5TGU0 170 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 C9orf135Q5VTT2 229 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 FAM205BPQ63HN1 556 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ZNF787Q6DD87 383 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 PGM2L1Q6PCE3 622 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 TBPL2Q6SJ96 375 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 KLHL17Q6TDP4 642 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 STAC2Q6ZMT1 411 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 SLC46A3Q7Z3Q1 461 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 P2RY8Q86VZ1 359 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 WFDC8Q8IUA0 241 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 EPHX4Q8IUS5 362 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 LRRC17Q8N6Y2 441 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 OR52L1Q8NGH7 329 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 GNPDA2Q8TDQ7 276 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CANT1Q8WVQ1 401 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ALKBH3Q96Q83 286 aaPredicted RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 RBP7Q96R05 134 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 KCNS3Q9BQ31 491 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 EMC6Q9BV81 110 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 POLDIP3Q9BY77 421 aaKnown RBP7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 ULBP2Q9BZM5 246 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 LINC00470Q9BZP3 86 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 KCNN2Q9H2S1 579 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 MED29Q9NX70 200 aa7.19□□□□□ -1.26
TM4SF1-204ENST00000493348 CRIM1Q9NZV1 1036 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms