RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 DBHP09172 617 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CST2P09228 141 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SP9P0CG40 484 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 FOLR1P15328 257 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 IDSP22304 550 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 FCARP24071 287 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 PSMA1P25786 263 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 GDF1P27539 372 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RPS19P39019 145 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 GPR1P46091 355 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 GYG1P46976 350 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF134P52741 427 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CTSWP56202 376 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 MAZP56270 477 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RHOAP61586 193 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RPS15AP62244 130 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DYNLL1P63167 89 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ZXDBP98169 803 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 OC90Q02509 493 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 EMX2Q04743 252 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CRYZQ08257 329 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 C1orf61Q13536 156 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CCNIQ14094 377 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CTTNQ14247 550 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 KPNB1Q14974 876 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CDK10Q15131 360 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 TEAD2Q15562 447 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 OR8G1Q15617 311 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ZIC1Q15915 447 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 CYP1B1Q16678 543 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RSPO4Q2I0M5 234 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF630Q2M218 657 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ODF4Q2M2E3 257 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 FAM214AQ32MH5 1076 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DCAF10Q5QP82 559 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 AGAP7PQ5VUJ5 663 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RWDD4Q6NW29 188 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SLC27A4Q6P1M0 643 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ANKRD16Q6P6B7 361 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 LCTLQ6UWM7 567 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 RBM44Q6ZP01 1051 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SLC36A1Q7Z2H8 476 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 WDR53Q7Z5U6 358 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 TMPRSS11BQ86T26 416 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 PEG10Q86TG7 708 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ERI1Q8IV48 349 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SLC34A3Q8N130 599 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DNAJC22Q8N4W6 341 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SMIM20Q8N5G0 67 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 AQP11Q8NBQ7 271 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ATP6V1C2Q8NEY4 427 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 NLGN4YQ8NFZ3 816 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SLC26A10Q8NG04 563 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 OR1F12Q8NHA8 337 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 FAM45AQ8TCE6 357 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 AENQ8WTP8 325 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 MOB3AQ96BX8 217 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 OR10C1Q96KK4 312 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DEFB118Q96PH6 123 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ZNF382Q96SR6 550 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 KLF6Q99612 283 aaPredicted RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ARHGDIGQ99819 225 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 NDC1Q9BTX1 674 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 SLC2A11Q9BYW1 496 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 LHPPQ9H008 270 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ANKRD19PQ9H560 264 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DHX35Q9H5Z1 703 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ARMC7Q9H6L4 198 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ALG9Q9H6U8 611 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 TLE6Q9H808 572 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 GNG12Q9UBI6 72 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 DHCR7Q9UBM7 475 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 FBLN5Q9UBX5 448 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 GNPTGQ9UJJ9 305 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ABT1Q9ULW3 272 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ANGPT4Q9Y264 503 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 LSM4Q9Y4Z0 139 aaKnown RBP3.79□□□□□ -1.8
BRCA1-220ENST00000492859 ADGRA2Q96PE1 1338 aa3.79□□□□□ -1.8
BRCA1-220ENST00000492859 C9orf84Q5VXU9 1444 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 FGD6Q6ZV73 1430 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TMEM150BA6NC51 233 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TVP23AA6NH52 213 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MYMKA6NI61 221 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 C5orf58C9J3I9 102 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 GPR31O00270 319 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 TP53I11O14683 189 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 DEAF1O75398 565 aaPredicted RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 VENTXO95231 258 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 LATS1O95835 1130 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MT-CO2P00403 227 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 HLA-HP01893 362 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 MT-ND4P03905 459 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 PRKCGP05129 697 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 F13BP05160 661 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 BCHEP06276 602 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 RHOCP08134 193 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 FAM87AP0C7U9 286 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 C8orf88P0DMB2 117 aa3.78□□□□□ -1.8
BRCA1-220ENST00000492859 HIST1H1EP10412 219 aaKnown RBP3.78□□□□□ -1.8
BRCA1-220ENST00000492859 LIPCP11150 499 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms