RNA–Protein interactions for RNA: ENST00000492417.5

TRA2B-215, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 4,141 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-215ENST00000492417 BPIFA2Q96DR5 249 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 COG8Q96MW5 612 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF681Q96N22 645 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 RDH12Q96NR8 316 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SLC38A1Q9H2H9 487 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ENAMQ9NRM1 1142 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SIRT3Q9NTG7 399 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GPATCH2Q9NW75 528 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 NOX1Q9Y5S8 564 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 IER3IP1Q9Y5U9 82 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PKDREJQ9NTG1 2253 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CCDC88CQ9P219 2028 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 IGHV1-45A0A0A0MS14 117 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TRGV5A0A0B4J1U4 118 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TRBV4-1A0A0J9YWV2 114 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 C5orf51A6NDU8 294 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 OR2T1O43869 369 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ICMTO60725 284 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 MRPL33O75394 65 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SEC14L2O76054 403 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FARS2O95363 451 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 MT-ND2P03891 347 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CD2P06729 351 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SPARCP09486 303 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CD79AP11912 226 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF3P17036 446 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 DRD5P21918 477 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CLDN17P56750 224 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 NCS1P62166 190 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TXNL4AP83876 142 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PDE7AQ13946 482 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FXNQ16595 210 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 LRIF1Q5T3J3 769 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SHQ1Q6PI26 577 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 B3GLCTQ6Y288 498 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FRRS1Q6ZNA5 592 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 Q6ZNX1 250 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FAM109AQ8N4B1 249 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF454Q8N9F8 522 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 OR13C2Q8NGS9 318 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 OR5W2Q8NH69 310 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 INTS12Q96CB8 462 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 HS6ST2Q96MM7 605 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF471Q9BX82 626 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF350Q9GZX5 532 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ARL6Q9H0F7 186 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 B3GAT2Q9NPZ5 323 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CCM2LQ9NUG4 571 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SIDT1Q9NXL6 827 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FLRT3Q9NZU0 649 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GLS2Q9UI32 602 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 POFUT2Q9Y2G5 429 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 EPG5Q9HCE0 2579 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 AGAP5A6NIR3 686 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FAM183AA6NL82 134 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PSMD9O00233 223 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TNFSF11O14788 317 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PIP5K1CO60331 668 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 BCAS1O75363 584 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 RP2O75695 350 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 NKX2-2O95096 273 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TBX6O95947 436 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PNMTP11086 282 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ACVR1BP36896 505 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 MAP2K4P45985 399 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PRKXP51817 358 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ARFIP1P53367 373 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 EMP3P54852 163 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 UBE2NP61088 152 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CSNK2A1P68400 391 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GALEQ14376 348 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PON3Q15166 354 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TOMM34Q15785 309 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GTF2IRD2BQ6EKJ0 949 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 LCN8Q6JVE9 175 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 NIPAL3Q6P499 406 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 LEG1Q6P5S2 330 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 Q6ZPB1 254 aaPredicted RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GTF2IRD2Q86UP8 949 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 COMMD7Q86VX2 200 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ATCAYQ86WG3 371 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 MSRB3Q8IXL7 192 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 EXD3Q8N9H8 876 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SDR9C7Q8NEX9 313 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF675Q8TD23 568 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 GNPDA2Q8TDQ7 276 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF721Q8TF20 911 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 PNPLA2Q96AD5 504 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 SARAFQ96BY9 339 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ADAD1Q96M93 576 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TNFRSF13CQ96RJ3 184 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 FAM173AQ9BQD7 235 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CST11Q9H112 138 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZFP64Q9NPA5 681 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ASB6Q9NWX5 421 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 NLKQ9UBE8 527 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 ZNF69Q9UC07 566 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 CES1P1Q9UKY3 287 aa4.08□□□□□ -1.76
TRA2B-215ENST00000492417 EXO1Q9UQ84 846 aaKnown RBP4.08□□□□□ -1.76
TRA2B-215ENST00000492417 TMEM5Q9Y2B1 443 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms