RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 NRMQ8IXM6 262 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 RNF113BQ8IZP6 322 aaKnown RBP13.34□□□□□ -0.27
SS18L1-204ENST00000491916 POMGNT2Q8NAT1 580 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 MOSPD2Q8NHP6 518 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 HSD17B8Q92506 261 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 BPIFA2Q96DR5 249 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 ASB9Q96DX5 294 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 NELFAQ9H3P2 528 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 MUC13Q9H3R2 512 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 LIME1Q9H400 295 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 MYO9AB2RTY4 2548 aa13.34□□□□□ -0.27
SS18L1-204ENST00000491916 SLC35F4A4IF30 521 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 HTR3EA5X5Y0 456 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 OR5H1A6NKK0 313 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 CDC42EP2O14613 210 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 RAD51DO75771 328 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 H1F0P07305 194 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 IFI30P13284 250 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 IFNGR1P15260 489 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 ZNF26P17031 533 aaPredicted RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 AHCYP23526 432 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 AQP2P41181 271 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 MAGEA2P43356 314 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 RPL18Q07020 188 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 TIMM23BQ5SRD1 257 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 PIWIL3Q7Z3Z3 882 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 C20orf196Q8IYI0 205 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 LRRC75AQ8NAA5 344 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 LRR1Q96L50 414 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 ALKBH3Q96Q83 286 aaPredicted RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 PIP5K1AQ99755 562 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 USB1Q9BQ65 265 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 BTBD10Q9BSF8 475 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 CADM1Q9BY67 442 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 POLDIP3Q9BY77 421 aaKnown RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 CLEC4MQ9H2X3 399 aaPredicted RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 ZNF226Q9NYT6 803 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 NPAP1Q9NZP6 1156 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 UPB1Q9UBR1 384 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 HIF3AQ9Y2N7 669 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 SLC25A15Q9Y619 301 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 MAP1AP78559 2803 aaPredicted RBP13.33□□□□□ -0.28
SS18L1-204ENST00000491916 CELSR1Q9NYQ6 3014 aa13.33□□□□□ -0.28
SS18L1-204ENST00000491916 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 BLOC1S5-TXNDC5H3BN57 136 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 CASKO14936 926 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 GYG2O15488 501 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 IFNA8P32881 189 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 OMPP47874 163 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 LIMS1P48059 325 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 RUNX1T1Q06455 604 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 TRAP1Q12931 704 aaKnown RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 MTX3Q5HYI7 312 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 TMPRSS11FQ6ZWK6 438 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 SLC35D2Q76EJ3 337 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 TMEM200AQ86VY9 491 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 P2RY8Q86VZ1 359 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 CYP4Z1Q86W10 505 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 DHFR2Q86XF0 187 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 WFDC8Q8IUA0 241 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 C1orf162Q8NEQ5 155 aaPredicted RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 ANKK1Q8NFD2 765 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 OR6X1Q8NH79 312 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 BCL2L2Q92843 193 aaPredicted RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 CCDC124Q96CT7 223 aaKnown RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 SEPHS2Q99611 448 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 GPA33Q99795 319 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 TMEM204Q9BSN7 226 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 GPR35Q9HC97 309 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 RAI1Q7Z5J4 1906 aaPredicted RBP13.32□□□□□ -0.28
SS18L1-204ENST00000491916 CREBBPQ92793 2442 aa13.32□□□□□ -0.28
SS18L1-204ENST00000491916 A0A1W2PR80 420 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 DPRXA6NFQ7 191 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 OR6C65A6NJZ3 312 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 GSC2O15499 205 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 RNF13O43567 381 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 SLC43A1O75387 559 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 PLAUP00749 431 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 HIST1H2ABP04908 130 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 F13BP05160 661 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 FABP3P05413 133 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 UMPSP11172 480 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 HMGA2P52926 109 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 BIDP55957 195 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 IL1RL1Q01638 556 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 ROR2Q01974 943 aaKnown RBP13.31□□□□□ -0.28
SS18L1-204ENST00000491916 CAMK2DQ13557 499 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 DNAL1Q4LDG9 190 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 ZNF730Q6ZMV8 503 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 HIST3H2AQ7L7L0 130 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 NANOGNBQ7Z5D8 188 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 ZDHHC21Q8IVQ6 265 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 OR1K1Q8NGR3 316 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 OR52J3Q8NH60 311 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 HIST1H2ACQ93077 130 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 TMEM54Q969K7 222 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 PIK3IP1Q96FE7 263 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 TNFRSF13CQ96RJ3 184 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 SLC17A5Q9NRA2 495 aa13.31□□□□□ -0.28
SS18L1-204ENST00000491916 FAM32AQ9Y421 112 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms