RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 A0A1W2PRQ8 180 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 LRRTM2O43300 516 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 NKX2-2O95096 273 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 C1QBP02746 253 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CLEC2LP0C7M8 214 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 PTBP1P26599 531 aaKnown RBP eCLIP8.5□□□□□ -1.051e-7■■■■■ 45.2
BRCA1-219ENST00000491747 FGF9P31371 208 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 HTR2BP41595 481 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 KCNJ5P48544 419 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GIPRP48546 466 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CCT3P49368 545 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ETV1P50549 477 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 PNLIPRP2P54317 469 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 RPS26P62854 115 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 RAB40BQ12829 278 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TNK1Q13470 666 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TPBGQ13641 420 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 EFR3AQ14156 821 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 C3AR1Q16581 482 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 DUSP5Q16690 384 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 MFSD12Q6NUT3 480 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM81Q6P7N7 255 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 CD300LDQ6UXZ3 194 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GHDCQ8N2G8 530 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 DUSP18Q8NEJ0 188 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 OR52P1PQ8NH57 321 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM163Q8TC26 289 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 RNF138Q8WVD3 245 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 GNRHR2Q96P88 292 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 RTN4RQ9BZR6 473 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF703Q9H7S9 590 aaPredicted RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 ZCCHC3Q9NUD5 404 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 FBXO34Q9NWN3 711 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 TMA7Q9Y2S6 64 aaKnown RBP8.5□□□□□ -1.05
BRCA1-219ENST00000491747 OR10H1Q9Y4A9 318 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 KCNE3Q9Y6H6 103 aa8.5□□□□□ -1.05
BRCA1-219ENST00000491747 POLEQ07864 2286 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 GNB5O14775 395 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 CASKO14936 926 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ORC5O43913 435 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SLC19A2O60779 497 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF780AO75290 641 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 HMGN2P05204 90 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 INPP1P49441 399 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SMSP52788 366 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 GAS1P54826 345 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 RAB25P57735 213 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 HOXC5Q00444 222 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 GINS1Q14691 196 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SPDYE7PQ495Y7 208 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 PAMR1Q6UXH9 720 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF767PQ75MW2 155 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ZAR1Q86SH2 424 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FJX1Q86VR8 437 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FAM109AQ8N4B1 249 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 IQCF1Q8N6M8 205 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SLC9A6Q92581 669 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ZNF582Q96NG8 517 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 MS4A4EQ96PG1 132 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 COQ7Q99807 217 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 METTL7AQ9H8H3 244 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 MRPS18AQ9NVS2 196 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 COMMD3Q9UBI1 195 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TNFRSF10DQ9UBN6 386 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SH3BGRL2Q9UJC5 107 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TINAGQ9UJW2 476 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 USP9XQ93008 2570 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TRGV8A0A0C4DH27 118 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 ACOT7O00154 380 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 PRODHO43272 600 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 LYRM1O43325 122 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 DNAJC13O75165 2243 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 AGFG2O95081 481 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 IL33O95760 270 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 IGHG3P01860 377 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TP53P04637 393 aaPredicted RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 GSTM3P21266 225 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 CFL1P23528 166 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 APEX1P27695 318 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 IL12BP29460 328 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 P2RX3P56373 397 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 RPS25P62851 125 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 LASP1Q14847 261 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SNAPC1Q16533 368 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 C4orf17Q53FE4 359 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FAM209AQ5JX71 171 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 OR2G6Q5TZ20 316 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TYW3Q6IPR3 259 aaKnown RBP8.49□□□□□ -1.05
BRCA1-219ENST00000491747 CNIH2Q6PI25 160 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 CREB3L2Q70SY1 520 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 CDRT4Q8N9R6 151 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 WDSUB1Q8N9V3 476 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 TMEM41AQ96HV5 264 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FUZQ9BT04 418 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FNDC11Q9BVV2 318 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 UBQLN3Q9H347 655 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 SERHL2Q9H4I8 314 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 PPP1R3EQ9H7J1 279 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 Q9N2J8 555 aa8.49□□□□□ -1.05
BRCA1-219ENST00000491747 FGF20Q9NP95 211 aaPredicted RBP8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms