RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 MS4A18Q3C1V0 323 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 AVPI1Q5T686 147 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ATG16L1Q676U5 607 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF627Q7L945 461 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF584Q8IVC4 421 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 GPR137CQ8N3F9 429 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF781Q8N8C0 355 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 OR52P1PQ8NH57 321 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 FGFBP3Q8TAT2 258 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 RNF217Q8TC41 542 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 C22orf15Q8WYQ4 148 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 DVL3Q92997 716 aaPredicted RBP11.3□□□□□ -0.6
USF1-206ENST00000491629 TAAR8Q969N4 342 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 TSPAN32Q96QS1 320 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF665Q9H7R5 613 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 PPCSQ9HAB8 311 aa11.3□□□□□ -0.6
USF1-206ENST00000491629 ZNF443Q9Y2A4 671 aaPredicted RBP11.3□□□□□ -0.6
USF1-206ENST00000491629 IGKV1D-42A0A075B6H8 117 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ERICH4A6NGS2 130 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 E9PBE3 544 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 M0R082 166 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 M0R3G1 203 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 CLPTM1O96005 669 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ALDOCP09972 364 aaKnown RBP11.29□□□□□ -0.6
USF1-206ENST00000491629 NUDT17P0C025 328 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 NME5P56597 212 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 UFM1P61960 85 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 MRPS11P82912 194 aaKnown RBP11.29□□□□□ -0.6
USF1-206ENST00000491629 SCGB2A2Q13296 93 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 GNA13Q14344 377 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ALKBH6Q3KRA9 238 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 RPS26P11Q5JNZ5 115 aaPredicted RBP11.29□□□□□ -0.6
USF1-206ENST00000491629 RNF220Q5VTB9 566 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 CCDC36Q8IYA8 594 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 PEX5LQ8IYB4 626 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 C20orf196Q8IYI0 205 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ZNF417Q8TAU3 575 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ZIM3Q96PE6 472 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 ZNF587Q96SQ5 575 aaPredicted RBP11.29□□□□□ -0.6
USF1-206ENST00000491629 EMC6Q9BV81 110 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 SUCNR1Q9BXA5 334 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 MED4Q9NPJ6 270 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 DOCK11Q5JSL3 2073 aa11.29□□□□□ -0.6
USF1-206ENST00000491629 A0A096LPI6 279 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 TLDC2A0PJX2 215 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 CDC14BO60729 498 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 MPZL1O95297 269 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 AHSA1O95433 338 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 PATE4P0C8F1 98 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 HKR1P10072 659 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 CD79AP11912 226 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 ETFAP13804 333 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 B4GALT1P15291 398 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 GRPRP30550 384 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 S100A3P33764 101 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 GIPRP48546 466 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 COPZ1P61923 177 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 MVKQ03426 396 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 MFSD13AQ14CX5 517 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 GSG1Q2KHT4 349 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 LIN52Q52LA3 116 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 CARD17Q5XLA6 110 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 ACSM5Q6NUN0 579 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 ZNF621Q6ZSS3 439 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 COMTD1Q86VU5 262 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 PAQR4Q8N4S7 273 aaPredicted RBP11.28□□□□□ -0.6
USF1-206ENST00000491629 VPS37AQ8NEZ2 397 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 SLC38A5Q8WUX1 472 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 GTF3AQ92664 365 aaKnown RBP11.28□□□□□ -0.6
USF1-206ENST00000491629 TAF15Q92804 592 aaKnown RBP eCLIP11.28□□□□□ -0.6
USF1-206ENST00000491629 TXNDC15Q96J42 360 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 C1orf147Q96MC9 270 aaPredicted RBP11.28□□□□□ -0.6
USF1-206ENST00000491629 JMJD8Q96S16 334 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 ZNF385DQ9H6B1 395 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 ARGLU1Q9NWB6 273 aaPredicted RBP11.28□□□□□ -0.6
USF1-206ENST00000491629 ZNF446Q9NWS9 450 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 PPIAL4AQ9Y536 164 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 CACNG2Q9Y698 323 aa11.28□□□□□ -0.6
USF1-206ENST00000491629 LOC102725191A0A1B0GVB3 256 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 TYROBPO43914 113 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 IGHV2-5P01817 119 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
USF1-206ENST00000491629 CBLP22681 906 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 PTDSS1P48651 473 aaKnown RBP11.27□□□□□ -0.61
USF1-206ENST00000491629 CLNS1AP54105 237 aaKnown RBP11.27□□□□□ -0.61
USF1-206ENST00000491629 CCL8P80075 99 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 HNRNPA0Q13151 305 aaKnown RBP11.27□□□□□ -0.61
USF1-206ENST00000491629 RAB39AQ14964 217 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 DPY19L1Q2PZI1 675 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 ZNF311Q5JNZ3 666 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 SHISA2Q6UWI4 295 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 LRRC34Q8IZ02 419 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 PIK3C3Q8NEB9 887 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 LRRC58Q96CX6 371 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 PANX1Q96RD7 426 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 SORT1Q99523 831 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 ZNF416Q9BWM5 594 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 SPATA9Q9BWV2 254 aa11.27□□□□□ -0.61
USF1-206ENST00000491629 MED29Q9NX70 200 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms