RNA–Protein interactions for RNA: ENST00000489563.1

AC055855.1-201, humanhuman

BASIC

Gene AC055855.1, Length 579 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.1-201ENST00000489563 MAP3K8P41279 467 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 GRIA1P42261 906 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 CASP4P49662 377 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 KLK7P49862 253 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 GPM6AP51674 278 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 EFNB2P52799 333 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 GBX2P52951 348 aaPredicted RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 NUP107P57740 925 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RPS14P62263 151 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 CKAP4Q07065 602 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 NCBP1Q09161 790 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 ASPHQ12797 758 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 EXOC3L2Q2M3D2 409 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 GPRC6AQ5T6X5 926 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 OR4F3Q6IEY1 312 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 ZSCAN25Q6NSZ9 544 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 TMIGD1Q6UXZ0 262 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RNF165Q6ZSG1 346 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 C20orf203Q8NBC4 194 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 OR52M1Q8NGK5 317 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RPUSD4Q96CM3 377 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RBMXL1Q96E39 390 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RPRD1AQ96P16 312 aaPredicted RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 CLCC1Q96S66 551 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 SECISBP2Q96T21 854 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 VCX2Q9H322 139 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 NHEJ1Q9H9Q4 299 aaPredicted RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 POLE4Q9NR33 117 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 SMOXQ9NWM0 555 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 CDH9Q9ULB4 789 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 TMCC3Q9ULS5 477 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 RPL36Q9Y3U8 105 aaKnown RBP2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 FREM2Q5SZK8 3169 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 FHAD1B1AJZ9 1412 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 PZPP20742 1482 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 MROH1Q8NDA8 1641 aa2.39□□□□□ -2.03
AC055855.1-201ENST00000489563 PRDM15P57071 1507 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 GPATCH8Q9UKJ3 1502 aaKnown RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 COL4A6Q14031 1691 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TOPAZ1Q8N9V7 1692 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TRAV26-1A0A087WT03 109 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 IGHV1OR21-1A0A087WYE8 117 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 IQANK1A0A1B0GTG1 560 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TCRBV9S1A1TA0A576 114 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PSMB11A5LHX3 300 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PCP4L1A6NKN8 68 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 A8MXQ7 604 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 GFYI3L273 518 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF208O43345 1280 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 HCRTR1O43613 425 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF861PO60384 105 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 SPAG6O75602 509 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 KLF8O95600 359 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 OXSR1O95747 527 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 POU2F1P14859 743 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PCMT1P22061 227 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 CXCR2P25025 360 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PRRC2AP48634 2157 aaKnown RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 HNMTP50135 292 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 KPNA2P52292 529 aaKnown RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 ZNF133P52736 654 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 GRB7Q14451 532 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PDK3Q15120 406 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PARP15Q460N3 678 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 BCL7AQ4VC05 210 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 MARCH8Q5T0T0 291 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 OR52E8Q6IFG1 317 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 Q6ZN92 141 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 Q6ZPB1 254 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 RGS9BPQ6ZS82 235 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PGAP1Q75T13 922 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 SLC26A11Q86WA9 606 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 PNKDQ8N490 385 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 LINC01555Q8NAE3 123 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 OR51S1Q8NGJ8 323 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 NEIL3Q8TAT5 605 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 UBE2E3Q969T4 207 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 CXorf40BQ96DE9 158 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TIMD4Q96H15 378 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 RNF2Q99496 336 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 NPAS2Q99743 824 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 CCT7Q99832 543 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 MRPL45Q9BRJ2 306 aaKnown RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TMEM43Q9BTV4 400 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 CAPS2Q9BXY5 557 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 THUMPD1Q9NXG2 353 aaKnown RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 SMPD3Q9NY59 655 aaPredicted RBP2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 HOXC10Q9NYD6 342 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 BFARQ9NZS9 450 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 TMCO1Q9UM00 188 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 CLEC4AQ9UMR7 237 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 HIVEP3Q5T1R4 2406 aa2.38□□□□□ -2.03
AC055855.1-201ENST00000489563 ASXL1Q8IXJ9 1541 aa2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 COL5A3P25940 1745 aaPredicted RBP2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 PINLYPA6NC86 204 aa2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 SHOX2O60902 331 aaPredicted RBP2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 GIPP09681 153 aaPredicted RBP2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 NR2C1P13056 603 aa2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 NCK1P16333 377 aa2.37□□□□□ -2.03
AC055855.1-201ENST00000489563 CCR1P32246 355 aa2.37□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms