RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CLDN18P56856 261 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 HSF1Q00613 529 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 POU3F1Q03052 451 aaPredicted RBP18.68■□□□□ 0.58
SND1-214ENST00000489417 PIGFQ07326 219 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 BCL2A1Q16548 175 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 TMEM225Q6GV28 225 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 LEG1Q6P5S2 330 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 UEVLDQ8IX04 471 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 ARIH2OSQ8N7S6 290 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 NPEPL1Q8NDH3 523 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 OR10D3Q8NH80 312 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 PTP4A1Q93096 173 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 MYDGFQ969H8 173 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 OXGR1Q96P68 337 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 NMNAT3Q96T66 252 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 DDOQ99489 341 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 COPS4Q9BT78 406 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP18.68■□□□□ 0.58
SND1-214ENST00000489417 NPIPA1Q9UND3 350 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 RASD1Q9Y272 281 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 TP53TG5Q9Y2B4 290 aa18.68■□□□□ 0.58
SND1-214ENST00000489417 CNTRLQ7Z7A1 2325 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 LOC102725191A0A1B0GVB3 256 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 TRIM64CA6NLI5 447 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 RGS10O43665 173 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 CXCL13O43927 109 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 HTR1AP08908 422 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 PIPP12273 146 aaPredicted RBP18.67■□□□□ 0.58
SND1-214ENST00000489417 IFNGR1P15260 489 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 ZNF708P17019 499 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 HTR1FP30939 366 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 EIF1AXP47813 144 aaKnown RBP18.67■□□□□ 0.58
SND1-214ENST00000489417 TUBA4AP68366 448 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 MELKQ14680 651 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 SLC35D2Q76EJ3 337 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 MEIOBQ8N635 442 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 TIGARQ9NQ88 270 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 B3GNT3Q9Y2A9 372 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 SNX5Q9Y5X3 404 aa18.67■□□□□ 0.58
SND1-214ENST00000489417 OR6C68A6NDL8 312 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 XKRYO14609 159 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ARHGEF9O43307 516 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 MRPS14O60783 128 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 RAMP1O60894 148 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 BCL10O95999 233 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 CLPTM1O96005 669 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 IGHG3P01860 377 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ENPP1P22413 925 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 C1DQ13901 141 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 INAQ16352 499 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 KLHL12Q53G59 568 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ARMC4Q5T2S8 1044 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 FAM205BPQ63HN1 556 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 VASNQ6EMK4 673 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 RPUSD3Q6P087 351 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 NHLRC1Q6VVB1 395 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 MEPCEQ7L2J0 689 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 ADCK1Q86TW2 530 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 GHDCQ8N2G8 530 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 STX19Q8N4C7 294 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 OR9Q1Q8NGQ5 310 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ZPLD1Q8TCW7 415 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ASB10Q8WXI3 467 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 RNFT2Q96EX2 444 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 SNX18Q96RF0 628 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 UCN2Q96RP3 112 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 CCDC90BQ9GZT6 254 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 OR51V1Q9H2C8 321 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 LHX6Q9UPM6 363 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 URB1O60287 2271 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 IGHV3-15A0A0B4J1V0 119 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 A6NIZ1 184 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 SMAD9O15198 467 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 VAMP5O95183 116 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 RENP00797 406 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 MT-ND2P03891 347 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 CDK1P06493 297 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 FREM3P0C091 2139 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 SLC2A5P22732 501 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 MTNR1AP48039 350 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 SLC25A1P53007 311 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 RAP1BP61224 184 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 RAP1AP62834 184 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 TMED1Q13445 227 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 PRSS48Q7RTY5 328 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 GPAT4Q86UL3 456 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 CPNE4Q96A23 557 aaPredicted RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 TAAR6Q96RI8 345 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 NMNAT2Q9BZQ4 307 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 TSPAN10Q9H1Z9 355 aaPredicted RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 MRPS18AQ9NVS2 196 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 SPRR3Q9UBC9 169 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 WARS2Q9UGM6 360 aaKnown RBP18.66■□□□□ 0.58
SND1-214ENST00000489417 ACACAQ13085 2346 aa18.66■□□□□ 0.58
SND1-214ENST00000489417 ASPMQ8IZT6 3477 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 TMEM8BA6NDV4 472 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 CCDC182A6NF36 153 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 SLC22A31A6NKX4 558 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 H7C1C5 153 aa18.65■□□□□ 0.58
SND1-214ENST00000489417 TRAF3IP2O43734 574 aaPredicted RBP18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms