RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 NADK2Q4G0N4 442 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 MESTQ5EB52 335 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 GTF2IRD2BQ6EKJ0 949 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 TMEM225Q6GV28 225 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 INO80CQ6PI98 192 aaPredicted RBP8.98□□□□□ -0.97
USP11-211ENST00000489111 IGFL3Q6UXB1 125 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 SLC35D2Q76EJ3 337 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 GPR141Q7Z602 305 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 PXKQ7Z7A4 578 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 GPAT4Q86UL3 456 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 GTF2IRD2Q86UP8 949 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 MEIOBQ8N635 442 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 TMEM99Q8N816 258 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 NPEPL1Q8NDH3 523 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 PROKR2Q8NFJ6 384 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 OR2T4Q8NH00 348 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 C9orf43Q8TAL5 461 aaPredicted RBP8.98□□□□□ -0.97
USP11-211ENST00000489111 ZNF519Q8TB69 540 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 FCGR1BQ92637 280 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 RORBQ92753 470 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 LGALS12Q96DT0 336 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 HCAR1Q9BXC0 346 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 RPRD1BQ9NQG5 326 aaKnown RBP8.98□□□□□ -0.97
USP11-211ENST00000489111 DIMT1Q9UNQ2 313 aaKnown RBP8.98□□□□□ -0.97
USP11-211ENST00000489111 PCDHGB7Q9Y5F8 929 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 CEP295Q9C0D2 2601 aa8.98□□□□□ -0.97
USP11-211ENST00000489111 WDFY3Q8IZQ1 3526 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 PRSS37A4D1T9 235 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 DPPA5A6NC42 116 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 OR6C68A6NDL8 312 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 CCDC182A6NF36 153 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 NPIPA2E9PIF3 369 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 NPIPA3F8WFD2 350 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 MS4A18H0YCH9 400 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 MYL12BO14950 172 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ARHGEF9O43307 516 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 CXCL13O43927 109 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 VAMP5O95183 116 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 APOL3O95236 402 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ACTL6AO96019 429 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 GYPBP06028 91 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 HLA-DOBP13765 273 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ZNF43P17038 809 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SPI1P17947 270 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ENPP1P22413 925 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 DCKP27707 260 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 PSMB9P28065 219 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 C21orf33P30042 268 aaPredicted RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 CDKN2AP42771 156 aaKnown RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 MAP2K4P45985 399 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ALDH3B2P48448 385 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 CD97P48960 835 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 STARP49675 285 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 RAC3P60763 192 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 RPS3AP61247 264 aaKnown RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 PMP22Q01453 160 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 PON3Q15166 354 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 MS4A18Q3C1V0 323 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SLC35D3Q5M8T2 416 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ZNF362Q5T0B9 420 aaPredicted RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 DNM1P34Q6PK57 102 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 GGNQ86UU5 652 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SATL1Q86VE3 508 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 KDM8Q8N371 416 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 OR51G2Q8NGK0 314 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 OR52I1Q8NGK6 324 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 OR6K6Q8NGW6 343 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 OR10D3Q8NH80 312 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ZPLD1Q8TCW7 415 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 PTP4A1Q93096 173 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ABTB1Q969K4 478 aaPredicted RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 MUL1Q969V5 352 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 CPNE4Q96A23 557 aaPredicted RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 OXGR1Q96P68 337 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SNX18Q96RF0 628 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SIGLEC11Q96RL6 698 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 CNN2Q99439 309 aaKnown RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 CDCA4Q9BXL8 241 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 NMNAT2Q9BZQ4 307 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 SYT4Q9H2B2 425 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ACKR4Q9NPB9 350 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 FANCFQ9NPI8 374 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 TNFRSF10DQ9UBN6 386 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 ERGIC3Q9Y282 383 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 EXOSC1Q9Y3B2 195 aaKnown RBP8.97□□□□□ -0.97
USP11-211ENST00000489111 PCDHGB1Q9Y5G3 927 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 PIEZO1Q92508 2521 aa8.97□□□□□ -0.97
USP11-211ENST00000489111 TRGV5A0A0B4J1U4 118 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 IGHV3-15A0A0B4J1V0 119 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 SMIM31A0A1B0GVY4 71 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 CCDC160A6NGH7 325 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 ZNF814B7Z6K7 855 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 H0YC42 278 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 AKAP8O43823 692 aaKnown RBP8.96□□□□□ -0.98
USP11-211ENST00000489111 SYNGR4O95473 234 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 MRPL3P09001 348 aaKnown RBP8.96□□□□□ -0.98
USP11-211ENST00000489111 CLUP10909 449 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 JUNBP17275 347 aaPredicted RBP8.96□□□□□ -0.98
USP11-211ENST00000489111 SLC2A5P22732 501 aa8.96□□□□□ -0.98
USP11-211ENST00000489111 GSTT1P30711 240 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms