RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 LCN2P80188 198 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 EMX2Q04743 252 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 BAMBIQ13145 260 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 CHI3L2Q15782 390 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 NKPD1Q17RQ9 610 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 CARD17Q5XLA6 110 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 ZNF771Q7L3S4 317 aaPredicted RBP13.78□□□□□ -0.2
USP48-210ENST00000489108 VRK2Q86Y07 508 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 TMEM123Q8N131 208 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 BCL6BQ8N143 479 aaPredicted RBP13.78□□□□□ -0.2
USP48-210ENST00000489108 MGARPQ8TDB4 240 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 STK35Q8TDR2 534 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 TSPAN32Q96QS1 320 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 PTDSS2Q9BVG9 487 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 GRPEL1Q9HAV7 217 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 HINT3Q9NQE9 182 aaKnown RBP13.78□□□□□ -0.2
USP48-210ENST00000489108 ZNF224Q9NZL3 707 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 ZNF69Q9UC07 566 aa13.78□□□□□ -0.2
USP48-210ENST00000489108 IGHV1-69-2A0A0G2JMI3 117 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 CDHR4A6H8M9 788 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 FAM153BP0C7A2 387 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 NR2F1P10589 423 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 ARRB2P32121 409 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 GIPRP48546 466 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 EGR4Q05215 589 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 MAD2L1Q13257 205 aaPredicted RBP13.77□□□□□ -0.21
USP48-210ENST00000489108 CASP8Q14790 479 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 RAB39AQ14964 217 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 OCLNQ16625 522 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 ANXA8L1Q5VT79 327 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 TMEM154Q6P9G4 183 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 ZNF813Q6ZN06 617 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 ZNF836Q6ZNA1 936 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 TREML1Q86YW5 311 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 PEX5LQ8IYB4 626 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 VPS37AQ8NEZ2 397 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 KTI12Q96EK9 354 aaPredicted RBP13.77□□□□□ -0.21
USP48-210ENST00000489108 ZNF48Q96MX3 618 aaPredicted RBP13.77□□□□□ -0.21
USP48-210ENST00000489108 MECRQ9BV79 373 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 NOP53Q9NZM5 478 aaKnown RBP13.77□□□□□ -0.21
USP48-210ENST00000489108 DSPPQ9NZW4 1301 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 PRDM4Q9UKN5 801 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 CACNG2Q9Y698 323 aa13.77□□□□□ -0.21
USP48-210ENST00000489108 A0A096LPI6 279 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 NCF2P19878 526 aaPredicted RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 MDKP21741 143 aaPredicted RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 GTF2E2P29084 291 aaKnown RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 TEKQ02763 1124 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 SRSF4Q08170 494 aaKnown RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 MFSD13AQ14CX5 517 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 WHAMMP3Q1A5X7 153 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 MMEL1Q495T6 779 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 RGS7BPQ6MZT1 257 aaPredicted RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 USP51Q70EK9 711 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 RETREG3Q86VR2 466 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 WDFY1Q8IWB7 410 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 C20orf196Q8IYI0 205 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 CLIP4Q8N3C7 705 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 SYT14Q8NB59 555 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 OR52P1PQ8NH57 321 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 GPA33Q99795 319 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 EMC6Q9BV81 110 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 TXLNGYQ9BZA5 131 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 ZMAT3Q9HA38 289 aaKnown RBP13.76□□□□□ -0.21
USP48-210ENST00000489108 ASIC5Q9NY37 505 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 SLC7A8Q9UHI5 535 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 NUP50Q9UKX7 468 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 POFUT2Q9Y2G5 429 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 WNK1Q9H4A3 2382 aa13.76□□□□□ -0.21
USP48-210ENST00000489108 SMIM23A6NLE4 172 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 CLDN25C9JDP6 229 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 M0R082 166 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 TRAF3IP2O43734 574 aaPredicted RBP13.75□□□□□ -0.21
USP48-210ENST00000489108 RAB36O95755 333 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 SHBGP04278 402 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 RNASE1P07998 156 aaKnown RBP13.75□□□□□ -0.21
USP48-210ENST00000489108 PATE4P0C8F1 98 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 FAM157BP0CG42 384 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 B4GALT1P15291 398 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 SELENOVP59797 346 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 MAPK11Q15759 364 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 PCGF3Q3KNV8 242 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 COX20Q5RI15 118 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 LEG1Q6P5S2 330 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 ZNF627Q7L945 461 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 ZNF417Q8TAU3 575 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 RAB1CQ92928 201 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 ZNF587Q96SQ5 575 aaPredicted RBP13.75□□□□□ -0.21
USP48-210ENST00000489108 NKIRAS2Q9NYR9 191 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 GPR160Q9UJ42 338 aa13.75□□□□□ -0.21
USP48-210ENST00000489108 CCDC154A6NI56 674 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 MS4A18H0YCH9 400 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 AIM2O14862 343 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 TPD52L2O43399 206 aaKnown RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 AKAP8O43823 692 aaKnown RBP13.74□□□□□ -0.21
USP48-210ENST00000489108 HLA-DOBP13765 273 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 CBLP22681 906 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 GCH1P30793 250 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 LSP1P33241 339 aa13.74□□□□□ -0.21
USP48-210ENST00000489108 KLF3P57682 345 aaPredicted RBP13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms