RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 CDK6Q00534 326 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 POU3F1Q03052 451 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 DAG1Q14118 895 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 MAD2L1BPQ15013 274 aaPredicted RBP13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 OR1Q1Q15612 314 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 FAM69AQ5T7M9 428 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 MSANTD1Q6ZTZ1 278 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 UEVLDQ8IX04 471 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 C10orf53Q8N6V4 93 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 SMYD1Q8NB12 490 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 NUP37Q8NFH4 326 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 FGFBP3Q8TAT2 258 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 SLC38A4Q969I6 547 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 MRPL37Q9BZE1 423 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 SLCO1B3Q9NPD5 702 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 CCDC167Q9P0B6 97 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 MYEF2Q9P2K5 600 aaKnown RBP13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 RCE1Q9Y256 329 aa13.72□□□□□ -0.21
ERGIC3-217ENST00000488935 A0A087WUJ7 227 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 ZNF99A8MXY4 864 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 C11orf98E9PRG8 122 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 BMP2P12643 396 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 IFNGR1P15260 489 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 B4GALT1P15291 398 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 COL8A2P25067 703 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 ALDH3B1P43353 468 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 SH3BGRP55822 239 aaPredicted RBP13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 ZSWIM7Q19AV6 140 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 ALKBH6Q3KRA9 238 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 C6orf89Q6UWU4 347 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 ZNF813Q6ZN06 617 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 C20orf196Q8IYI0 205 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 GOLGA6L1Q8N7Z2 621 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 PIK3C3Q8NEB9 887 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 UBASH3BQ8TF42 649 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 TLCD1Q96CP7 247 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 LPAR2Q9HBW0 351 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 TMBIM4Q9HC24 238 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 B3GNT2Q9NY97 397 aa13.71□□□□□ -0.21
ERGIC3-217ENST00000488935 M0R3H8 397 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 WNT9BO14905 357 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 PDE5AO76074 875 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 OPN1SWP03999 348 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 AHCYP23526 432 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 PRKAR1BP31321 381 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 ARR3P36575 388 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 PTDSS1P48651 473 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 IDH3AP50213 366 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 CDH12P55289 794 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 RGS8P57771 180 aaPredicted RBP13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 FADDQ13158 208 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 PMS2P3Q13401 168 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 SCARB2Q14108 478 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 MFSD13AQ14CX5 517 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 C3orf36Q3SXR2 165 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 DHRS4L2Q6PKH6 230 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 NHLRC1Q6VVB1 395 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 RINLQ6ZS11 566 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 SPDL1Q96EA4 605 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 THOC1Q96FV9 657 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF442Q9H7R0 627 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC52A3Q9NQ40 469 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 THUMPD1Q9NXG2 353 aaKnown RBP13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF224Q9NZL3 707 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 POFUT2Q9Y2G5 429 aa13.7□□□□□ -0.22
ERGIC3-217ENST00000488935 NBEAL1Q6ZS30 2694 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 HAX1O00165 279 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 OR2T1O43869 369 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 RGS9O75916 674 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 HPXP02790 462 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 HOXB1P14653 301 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 ETS2P15036 469 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 NR4A1P22736 598 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 GIFP27352 417 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 GIPRP48546 466 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 STX1BP61266 288 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 SELPLGQ14242 412 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 RAB39AQ14964 217 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 AGKQ53H12 422 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 REEP3Q6NUK4 255 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 BLOC1S3Q6QNY0 202 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 RBM45Q8IUH3 476 aaKnown RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF786Q8N393 782 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 FAM169BQ8N8A8 192 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 LSMEM1Q8N8F7 131 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 OR6N1Q8NGY5 312 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 NEU4Q8WWR8 484 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 SLC47A1Q96FL8 570 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 ZNF75AQ96N20 296 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 ANKRD27Q96NW4 1050 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 OR51B6Q9H340 312 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 RAD21L1Q9H4I0 556 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 TMEM27Q9HBJ8 222 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 MYOZ1Q9NP98 299 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 TCF7L2Q9NQB0 619 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 REV1Q9UBZ9 1251 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 USP22Q9UPT9 525 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 CMAHPQ9Y471 501 aa13.69□□□□□ -0.22
ERGIC3-217ENST00000488935 A0A0B4J2E0 115 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms